Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_007029.1 Length=6307 Score E Sequences producing significant alignments: (Bits) Value seq5460 760 0.0 seq5419 264 5e-67 seq64171 192 2e-45 seq3522 172 2e-39 seq4487 152 2e-33 seq3304 122 3e-24 >seq5460 Length=1034484 Score = 760 bits (842), Expect = 0.0 Identities = 957/1312 (73%), Gaps = 56/1312 (4%) Strand=Plus/Plus Query 1463 ATACTAATAATGGCTGTGTGCAATAACAAACTTATTATCCATATTTAAATCTAAACTCTT 1522 ||| ||||||| || || ||||| ||||| | ||||| | ||| | ||| Sbjct 430362 ATAATAATAATAAATGCGTTTAATAAAAAACTCACATAACATATCTTGATCGCATCTCCG 430421 Query 1523 GCATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTCTAATGTAATCCAACCTTTCT 1582 |||||||||||| | || ||||||||| ||| ||| |||| ||| ||||| || || | Sbjct 430422 TCATTTTATTACGGAGACAGTTCTGAATGGATGAAGTATCTACTGTTATCCATCCCTTTT 430481 Query 1583 CACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCTTGCAGTTTCATCTAATCCTG 1642 |||| || |||||||||||| |||| || | |||||||||||| ||||||||||||||| Sbjct 430482 CACGCCCATACTCTTCAACAAATGTCAGTAGTACTGTTCTTGCATTTTCATCTAATCCTG 430541 Query 1643 GTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTCTTGACCCGGTTAATGAACAGA 1702 | || | | ||| ||||||||||||||||||| ||||||| |||| ||||||||||| | Sbjct 430542 GCCTTACGGCTGCCCCTTCGACATCGTAAGCTCTAGCTCTTAACCCTGTTAATGAACATA 430601 Query 1703 TGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGCAAT 1762 | | |||||||||| ||| |||||||| | |||||||| |||||||||||| ||||||| Sbjct 430602 TACTTAATGCACTCTGAGTAAAAATTTCAAGCAATAACATTCGAGCCAATGAATTGCAAT 430661 Query 1763 CTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTATGGG 1822 |||| ||||||||||||||||||||||| |||| |||||| || || || |||||||| | Sbjct 430662 CTTTCGACAATCTCTTGCAATTACTAAGTTTTACGGCATTAATATACACGTTGGTATGAG 430721 Query 1823 GCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGAGTCAT 1882 ||||||||||||||||||| || ||||||| ||||| |||||| |||||||||||||| | Sbjct 430722 GCATGAGTTCTACAAGTCCTGGCGCCATTTCACGATACTTTAAAGTCCATCTTGAGTCGT 430781 Query 1883 TTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTTGAGAACGTTTTTTCTTAGGAA 1942 ||||||||||||| |||||||||| ||||| || || ||| |||||||| |||| ||| Sbjct 430782 TTTCATCGTATTCCAGAGGTAAAACGAATTTGCGTTTATGACAACGTTTTCTCTTGAGAA 430841 Query 1943 CTTCATCAGTCTCATTATCACTATGGTCATTGCATTCCTCATCTCGTTGCTTTTGATTGC 2002 |||||| || ||||| | ||| |||||| ||| ||||| || Sbjct 430842 CTTCAT---------------TACAATCATTACCTTCATCATCTTGTTCTTTTTGTTTCT 430886 Query 2003 T-GTTGtttt--tttCGGATATCTCCTCAACTTCCACTATAATGTTTGTTGATTGAGATG 2059 | ||||||| | || ||||| | |||||||||| ||| | | | ||| |||| Sbjct 430887 TATTTGTTTTAATATCAGATATTTTCTCAACTTCCGTTATTGAGGCTTTCGATGATGATG 430946 Query 2060 TGGTCGGAATATCGCTGTTTGGACTACGGCTATTGACGATTAACTGTTTTAGATCTTTCA 2119 ||||||| ||| |||| || | ||||| || | ||| | || | | || || Sbjct 430947 CGGTCGGAGTATTGCTGACTGAATCGTGGCTACCAACAAGTAATTTCTTCACACTTTCCA 431006 Query 2120 ATGTTGCTGTATTATCAATTATTATTTGACGTAAGTTATTTACCAGGGTGTATGAGTTAG 2179 |||| ||||||||||| | | ||| || ||||| || | || | |||| || Sbjct 431007 TTGTTTTAGTATTATCAATCAATGTTTTACTTAAGTGATCCATCAACGAATATGTCATAA 431066 Query 2180 CAGAAACTGCATGCAGATTCCGTAAGACCGTAAGAAGTTCTATGAAAAATGTGGGGTCAA 2239 | ||| || ||| | || |||| |||||||| |||| | ||||||||| |||||| Sbjct 431067 CTGAAGATGTATGTAAATCTCGTATGACCGTAAAAAGTCCAGTGAAAAATGCGGGGTCTG 431126 Query 2240 GCATAGGTTGAGGATTTGACAATGAATTCGTTAATTTCGAATAGTTCTGAATAACAGATG 2299 | | || ||||| |||| | |||||| | || ||| || ||| |||||||||||| Sbjct 431127 CTAGAATTTTAGGATCTGACGAAGAATTCATCAAATTCAAAGTGTTTCGAATAACAGATG 431186 Query 2300 GTCGCTCCTGCTCACTGTCGTCGACGGGCTCTATTTCTTCAACACAACTTCTGTCGTTAG 2359 ||| |||||| ||||| || || ||||| |||||| |||||||||| || | || Sbjct 431187 GTCTCTCCTGTGTACTGTTTTCAACATGCTCTGTTTCTTTGGCACAACTTCTTTCATCAG 431246 Query 2360 ATTCGTCAACGTTTACTTCTGATGAACACAAATTTTGAATTGGAAAATCTTCACGAGTTG 2419 ||| ||| | || |||||||| ||| |||||| || |||| ||||||||||| || Sbjct 431247 ATTTTTCAGCAGGTATTTCTGATGTACATGAATTTTCCATCGGAAGATCTTCACGAGCTG 431306 Query 2420 GTGAGGGTTGAGTTTCACTCAAGCATTCGGATGCTTGACTCGGCTGTTCTGCGGCGTCAC 2479 |||| || ||| ||||||| |||| | | || Sbjct 431307 CTGAG---------------AA--------ATG-------TGGCTGTTTTGCGACTTTAC 431336 Query 2480 TAACAGATTCATTTGGCTCAACAACTTTTGACCGTTTCGAAGGAGTTTCTATGTCTGGGG 2539 || |||||||| || | ||| || ||||||||||| |||| || |||| | || || Sbjct 431337 TAGCAGATTCAGCAGGTTTAACTACGTTTGACCGTTTTGAAGCAGGTTCTGTATCGGGAT 431396 Query 2540 TAGGCAGCGTCGTTCGTTTTAGTTTCTTCGTTTCAGATTTGTCATCCTTTTTCGAGGTTA 2599 | || || | ||||||||| ||| | || ||| || ||||||| || |||||||||| || Sbjct 431397 TTGGTAGTGCCGTTCGTTTCAGTCTTTTTGTTGCATATTTGTCTTCATTTTTCGAGGATA 431456 Query 2600 CGACTAAATTCAGAGGTTTGTCAATCTCAT-CATTGAATTCGAGTTTCGWTTAGGTCTGC 2658 |||||||| || |||||||| |||||| | |||| || | |||| | ||| |||| Sbjct 431457 TGACTAAATCCAAGGGTTTGTCTGTCTCATGCTTTGATTTAGCGTTTTGCTTAAATCTG- 431515 Query 2659 CTGttttttttttCACCATCGTTGGTAATTCTTGATCTAAAACCGAAAATTATTAT-TAT 2717 || |||||||| |||| || | ||||| ||| ||||| | |||| |||||| | Sbjct 431516 -TG-AGTTTTTTTCTCCATTACTGATGATTCTGGATATAAAA-CAAAAAGTATTATGAAC 431572 Query 2718 TTTACATATTGGGCGGAAAAGACATTCAA-ACCTTTCTTTTGTATGCTACTA 2768 ||||| |||| | ||||||| || || || | | || ||||||| ||| Sbjct 431573 TTTACTTATTTTTC-AAAAAGACTTTTAATACATCTTTTGAGTATGCTGCTA 431623 Score = 105 bits (116), Expect = 3e-19 Identities = 175/249 (70%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 388 CAAATATTGCAGAACTTTCCGGTTTTTATCACATATAATAATTACTGCGCATGTTAGTGG 447 ||| |||||||||||||| ||||| |||||| | ||||||| ||| |||| || ||| Sbjct 428984 CAACTATTGCAGAACTTTGCGGTTCTTATCATTTTTAATAATAACTAGGCATAGTAATGG 429043 Query 448 TTA---TTCCATAT-CAATTTCCTTTATGACCCTCTGTTATCAGAGTAGTAACCGGAAAT 503 ||| ||||||| | ||| | | ||||||| | ||||||| || || |||||||||| Sbjct 429044 TTACTCATCCATATACGATTCACCTCATGACCCACCGTTATCACAGAAGAAACCGGAAAT 429103 Query 504 TGTCAAYTCATGTAGTCGCTTCGAGAAATAACAA-AGCAGTCCGTGCTCGACTCTTATCT 562 || | ||| |||| | || |||||| ||| || || | || | |||| | | Sbjct 429104 CGTTTATTCAATGAGTCATTACGGGAAATAGCAATCGCTATCGACGGTCTA-TCTTTTTT 429162 Query 563 TCGGGAAACGTGTTTATGTTTAGTCTCAAATGTATAGTTGTTATTGTTCAGAATATAACT 622 | |||| |||| ||||| || || | |||| ||| |||| | |||||||| | Sbjct 429163 AGGCAAAACATGTTATTGTTTGGTAACAGAAGTATTATTGGAATTGCACCGAATATAAAT 429222 Query 623 ATACACATT 631 | | || || Sbjct 429223 AAAAACTTT 429231 >seq5419 Length=782972 Score = 264 bits (292), Expect = 5e-67 Identities = 319/430 (74%), Gaps = 6/430 (1%) Strand=Plus/Minus Query 1519 TCTTGCATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTCTAATGTAATCCAACCT 1578 ||| ||||||||||||| |||||||| |||| |||| || | | || ||||||| Sbjct 238342 TCTAGCATTTTATTACGGATACTGTTTTGAAGGGATTTGGTATTCGACGTTTTCCAACCC 238283 Query 1579 TTCTCACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCTTGCAGTTTCATCTAAT 1638 || ||| || |||| | |||| || || | |||| ||||||| | || |||||| Sbjct 238282 TTAGCACTTCCATACTGCTTAACAAATTCCAGTATCACTTTTCTTGCGTTCTCGTCTAAT 238223 Query 1639 CCTGGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTCTTGACCCGGTTAATGAA 1698 || ||||||| | | |||| || |||||||||| ||||||| || || | ||| Sbjct 238222 CCGGGTCTGACATATTCTCCAAAGAGATCGTAAGCTTTGGCTCTTGCTCCAGTCATCGAA 238163 Query 1699 CAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTG 1758 || || |||| |||||| | | |||||| | | ||| | |||||| | || ||| Sbjct 238162 CATATTTTCAAAGCACTCGTTTTAAAAATTGCTAGTGTTAAAACTCGAGCTAGTGCGTTG 238103 Query 1759 CAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTA 1818 |||| ||||||||||||||||| | |||||| |||| |||||| || || || Sbjct 238102 CAATTGTTTGACAATCTCTTGCATTCACTAAGTTTTACTTCATTGACATACACGCCAGTG 238043 Query 1819 TGGGGCATGAGTTCTACAAGTCCCGGAGCC-ATTTGACGATGCTTTAAGGTCCATCTTGA 1877 || ||||||||||| ||||||||||| || | || |||| ||||||||||||| |||| Sbjct 238042 TGAGGCATGAGTTCAACAAGTCCCGGCGCAGACGTG-CGATACTTTAAGGTCCATTTTGA 237984 Query 1878 GTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTT--TGAGAACGTTTTTTC 1935 |||||||||||||||||||| ||||| |||||| || ||||| || || |||||||| Sbjct 237983 GTCATTTTCATCGTATTCTGCAGGTAGAACAAACTT--GCTTTGCTGGTAAAGTTTTTTC 237926 Query 1936 TTAGGAACTT 1945 || ||| || Sbjct 237925 TTCTGAATTT 237916 >seq64171 Length=1326 Score = 192 bits (212), Expect = 2e-45 Identities = 300/430 (70%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 1503 ATATTTAAATCTAAACTCTTGCATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTC 1562 |||||| |||||| ||||||||||| || || |||||||| ||||| | |||| Sbjct 553 ATATTTGGATCTAATTTCTTGCATTTTGTTCCGTATACTGTTTAAAATAGTCGCATTGTC 612 Query 1563 TAATGTAATCCAACCTTTCTCACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCT 1622 | | || ||| || | || ||| || |||||| || || | || || ||||| Sbjct 613 TCTTTTAGCCCACTTATTGGCTTGGGCGTGCTGTTCAACGTAAGTCAATAAAACCGTTCT 672 Query 1623 TGCAGTTTCATCTAATCCTGGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTCT 1682 |||| ||||||| || || || || | | || || |||| ||| | || |||||| Sbjct 673 TGCATTTTCATCCAAACCAGGCCTTACATGTGTCCCGTCGAAATCAAATGCCTTAGCTCT 732 Query 1683 TGACCCGGTTAATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAA 1742 | || ||||| ||||| | ||| ||||||| || |||||||| ||||| || || Sbjct 733 TACGCCAGTTAAGGAACATGTAAACAACGCACTCTCTGTAAAAATTTCTACCAACAATAA 792 Query 1743 TCGAGCCAATGATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATT 1802 ||| || | || |||| ||| ||||| ||||| || ||||| | || || || ||||| Sbjct 793 TCGTGCTAGTGTTTTGGAATTTTTTGCTAATCTTTTACAATTGATGAGTTTAATAGCATT 852 Query 1803 GATGTAGACATTGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTT 1862 | || || ||||| || ||||| |||||||| || || || ||||| | Sbjct 853 TACATACACGCCCGTATGTTCTATAAGTTCAACAAGTCCTGGTGCGTATTCACGATATCT 912 Query 1863 TAAGGTCCATCTTGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTTG 1922 || |||||| |||||||||||| || ||||| || ||||||| || | || ||| Sbjct 913 CAAAGTCCATTTTGAGTCATTTTTATTATATTCAGGCGGTAAAATAAGTGCACGAGATTG 972 Query 1923 AGAACGTTTT 1932 | |||||||| Sbjct 973 AAAACGTTTT 982 >seq3522 Length=29972 Score = 172 bits (190), Expect = 2e-39 Identities = 303/436 (69%), Gaps = 12/436 (3%) Strand=Plus/Plus Query 1525 ATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTCTAATGTAATCCAACCTTTCTCA 1584 ||||| | ||| |||||||||||||||||||| ||| | | ||||| | |||| Sbjct 3827 ATTTTTTGACGGATACTGTTCTGAATAGATTGGTAATCTGTTACATTCCAATCCTTCTGT 3886 Query 1585 CGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCTTGCAGTTTCATCTAATCCTGGT 1644 | || |||||| ||||| | | ||||| | | | ||||| |||||||||| ||| Sbjct 3887 AGTCCATACTCTGCAACAAACTTCAGCAATATTATCATTGCATGTTCATCTAATTTAGGT 3946 Query 1645 CTGATAGTTGCTCCTTC---GACATCGTAA--GCTCKAG--CTCTTGAC--CCGGTTAAT 1695 || | | ||| || || | | ||| ||| | || ||||| ||||| | | Sbjct 3947 CTTACATTTGTACCGTCGTTGTTAAGATAACTGCTTGTGGTCTGTTGACTGCCGGTCACT 4006 Query 1696 GAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGAT 1755 ||||| | |||| ||| | | |||||| ||||| | ||| | ||| |||| | Sbjct 4007 GAACATGTACTCAAAGCAATTTCAGTGAAGATTTCTGTAAGTAAATTTGCAGCGAATGTT 4066 Query 1756 TTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTG 1815 |||||||| || ||| | ||| || | | || ||| ||||| | || ||| | Sbjct 4067 TTGCAATCATTCGACTCTTTCTGACATTCAGCGAGTTTTTCAGCATTAACATACACACCG 4126 Query 1816 GTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTT 1875 | ||| ||| |||||||||||||||||||| | ||||| |||||| ||||||||| Sbjct 4127 GAATGTTCCATTAGTTCTACAAGTCCCGGAGCAGGCTCACGATACTTTAATGTCCATCTT 4186 Query 1876 GAGTCATTTTCATCGTATTCTGGAGGTA-AAACAAATTTTCGCTTT--TGAGAACGTTTT 1932 ||||||||| | || |||||||| || | | | || ||||||| | |||||||||| Sbjct 4187 GAGTCATTTGCGTCATATTCTGGTGGGAGATTCGAAAGCTCGCTTTCCTCAGAACGTTTT 4246 Query 1933 TTCTTAGGAACTTCAT 1948 ||||| ||| ||||| Sbjct 4247 TTCTTTGGATGTTCAT 4262 Score = 131 bits (144), Expect = 7e-27 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 1695 TGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGA 1754 |||||| | ||||||| || || ||||||||||| || ||||| ||||||||||| Sbjct 4465 TGAACATACACTCAATGCGCTTTTTGTGAAAATTTCAGGCAGTAACATTCGAGCCAATGT 4524 Query 1755 TTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATT 1814 | ||| || ||||||||||| || ||| || || ||||| | || ||| Sbjct 4525 CACACTATCATTCGACAATCTCTTACATTTAGCTAGATTGTCAGCATTAACATACACACA 4584 Query 1815 GGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCT 1874 || || ||| ||||| ||||||||| ||| || ||| | ||| | |||||||| Sbjct 4585 GGAATCTTCCATTAGTTCAACAAGTCCCAAAGCGTATTCACGGTACTTCAGTGTCCATCT 4644 Query 1875 TGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTTGAGAA 1926 ||||| ||||| |||||||||||| || | |||||| | || || |||||| Sbjct 4645 TGAGTTATTTTTATCGTATTCTGGTGGAAGAACAAACTGGCGTTTCTGAGAA 4696 Score = 80.6 bits (88), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 1707 CAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGCAATCTTT 1766 |||||| || | || |||||||| | || | |||||| |||| || ||| || || Sbjct 3631 CAATGCTTTCGTGGTAAAAATTTCAGTTAGTAGCTTTCGAGCTAATGTTTGGCAGTCATT 3690 Query 1767 TGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTATGGGGCAT 1826 |||||||||||||| | | | || ||| ||||| | || ||| || | | ||| Sbjct 3691 CGACAATCTCTTGCATTCAGTGAGTTTTTCAGCATTAACATACACACCGGAACGTTCCAT 3750 Query 1827 GAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGAGTCATTTT 1885 ||||| |||||||||||||| | |||| ||||| || || |||||| ||||| Sbjct 3751 TAGTTCAACAAGTCCCGGAGCAGGCTCTCGATATTTTAATGTAAATTTTGAGT-ATTTT 3808 >seq4487 Length=95434 Score = 152 bits (168), Expect = 2e-33 Identities = 279/406 (69%), Gaps = 5/406 (1%) Strand=Plus/Minus Query 1503 ATATTTAAATCTAAACTCTTGCATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTC 1562 |||||||| ||| | |||||||||||| || || ||||| || |||||| || | || Sbjct 88541 ATATTTAACTCTCATCTCTTGCATTTTGTTGCGGATACTATTTAGAATAGTATGGTTTTC 88482 Query 1563 -TAATGTAATCCAACCTTTCTCACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTC 1621 |||| | || ||||| | | || ||| | || || | | || ||||||| Sbjct 88481 ATAATACCAGCCCTCCTTTTTTGCAT--GT--TCTGCGACGTAATTCATTAATACTGTTC 88426 Query 1622 TTGCAGTTTCATCTAATCCTGGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTC 1681 ||||| ||| |||| || ||||| | ||| || || |||| |||| |||| Sbjct 88425 TTGCACGTTCGTCTAGCCCCGGTCTAACGTTTGTGCCATCCTGATCGAAAGCCTTGGCTC 88366 Query 1682 TTGACCCGGTTAATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACA 1741 ||| || || | ||||| | ||||||||| |||| || ||||| || |||| Sbjct 88365 TTGCGCCAGTCCAGGAACAAGTACCCAATGCACTTGTAGTAAATATTTCACTCAGCAACA 88306 Query 1742 ATCGAGCCAATGATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCAT 1801 |||||| || |||||||||||||| ||||||| |||||| || | || || || | Sbjct 88305 TTCGAGCTAAAGATTTGCAATCTTTCGACAATCGCTTGCAGTTTGTCAGTGCTAAAGCTT 88246 Query 1802 TGATGTAGACATTGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCT 1861 ||| || ||| || || ||| ||||| ||||| || ||||| | ||| | || Sbjct 88245 TGACATACACACCGGAATATTCCATTAGTTCAACAAGACCTGGAGCAGGCTCACGGTACT 88186 Query 1862 TTAAGGTCCATCTTGAGTCATTTTCATCGTATTCTGGAGGTAAAAC 1907 || |||||| ||| ||| |||| || |||||| | ||||| ||| Sbjct 88185 GTAGTGTCCATTTTGTGTCGTTTTTATTGTATTCCGCAGGTAGAAC 88140 >seq3304 Length=26202 Score = 122 bits (134), Expect = 3e-24 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1707 CAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGCAATCTTT 1766 ||||||||| ||| ||||||||| || ||||| || ||| |||| | ||||| || Sbjct 12524 CAATGCACTTGAAGTAAAAATTTCGCTCAGTAACATTCTAGCTAATGTTACACAATCATT 12465 Query 1767 TGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTATGGGGCAT 1826 ||||| | |||| || | || || ||||| | || |||| || ||| ||| Sbjct 12464 CGACAACTGCATGCATTTCCCGAGTTTGTCAGCATTAACATACACATCGGAATGTTCCAT 12405 Query 1827 GAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGAGTCATTTTC 1886 ||||| |||||||||||||| | ||||| ||||| ||||||||||||| |||| | Sbjct 12404 TAGTTCGACAAGTCCCGGAGCAGGCTCACGATACTTTAGAGTCCATCTTGAGTTATTTGC 12345 Query 1887 ATCGTATTCTGGAGGTA 1903 ||| |||||||||||| Sbjct 12344 GTCGAATTCTGGAGGTA 12328 Score = 118 bits (130), Expect = 4e-23 Identities = 179/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 1695 TGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGA 1754 |||||| || ||||||||| | ||||||| |||| | || |||| ||||||||||| Sbjct 1760 TGAACAAATACTCAATGCACGTATTGTGAAAACTTCGGCTAACAACATTCGAGCCAATGT 1701 Query 1755 TTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATT 1814 | | | || ||| | |||||||||||| || || | || | | | || ||| Sbjct 1700 TATACTATTTTTAGCCAATCTCTTGCATTTCGCGAGTTGGATTACTTCAACATACACACA 1641 Query 1815 GGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCT 1874 || || | || ||||| || | ||||||||| || ||| | ||| | |||||||| Sbjct 1640 GGAATCGTTTATTAGTTCAACTAATCCCGGAGCATATTCACGGTACTTAAGAGTCCATCT 1581 Query 1875 TGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTTGAGAACGTTTTTT 1934 ||||| ||||| |||||||||||| || | | ||| || || | ||||| |||| Sbjct 1580 TGAGTTATTTTTATCGTATTCTGGTGGAAGTAGAAACCGGCGTTTCTTAGAACCGTTTTC 1521 Query 1935 CTTAGGAACTTCATC 1949 |||||| ||| || Sbjct 1520 ATTAGGAGGTTCCTC 1506 Score = 114 bits (126), Expect = 5e-22 Identities = 166/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 1690 GTTAATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCC 1749 |||| ||||| | | ||||| || ||| |||| ||| | | ||| ||| |||| Sbjct 22807 GTTATGGAACATGTCTTTAATGCTCTTGCAGTAAAAACTTCTATTAGTAATAATTCAGCC 22748 Query 1750 AATGATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAG 1809 | | |||||||| ||||||||||||||||||| | ||| | | |||| | || Sbjct 22747 ATCGTTTTGCAATTATTTGACAATCTCTTGCAATCAGCAAGTTGGTCGACATTAACATAT 22688 Query 1810 ACATTGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTC 1869 ||| || || ||| ||||| ||||| |||||||| ||||| ||||| ||| Sbjct 22687 ACACCGGAATATTCCATTAGTTCAACAAGCCCCGGAGCAGGCCCACGATACTTTAGTGTC 22628 Query 1870 CATCTTGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTTGA 1923 ||| ||||||||||||||| ||||||| |||| || | ||| || |||||| Sbjct 22627 CATTTTGAGTCATTTTCATTGTATTCTCGAGG---AAGATCTTTACGTTTTTGA 22577 Score = 109 bits (120), Expect = 2e-20 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 1694 ATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATG 1753 ||| ||| | ||||||||||| | ||| ||||||||| | ||| | ||| |||| Sbjct 1338 ATGTACACGTAGTCAATGCACTTTCAGTAAAAATTTCGGAAAGTAAATTTGCAGCGAATG 1279 Query 1754 ATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACAT 1813 ||||||||| || ||| || ||| || | | | || || ||| | || ||| Sbjct 1278 TTTTGCAATCATTCGACCATTTCTGACATTCAGTGAGTTTGTCAAAATTAACATACACAC 1219 Query 1814 TGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATC 1873 || || || ||||| | |||||||||||| | ||||| ||||| ||||||| Sbjct 1218 CGGAATATTCTATTAGTTCAATAAGTCCCGGAGCAGGCTCACGATACTTTAGTGTCCATC 1159 Query 1874 TTGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATTT 1913 |||||| |||||||| |||||||||||| |||||| || Sbjct 1158 TTGAGTTGTTTTCATCATATTCTGGAGGTGGAACAAACTT 1119 Score = 105 bits (116), Expect = 3e-19 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 1706 TCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGCAATCTT 1765 |||| ||||| ||| || |||||| ||||| ||| |||||||| |||| ||| Sbjct 12117 TCAAAGCACTTAAAGTAAAGATTTCGGTTAATAATAATTGAGCCAATCTATTGCTATCAC 12058 Query 1766 TTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTATGGGGCA 1825 ||||||| ||| ||| | | || || ||||| | || || | | || | Sbjct 12057 TTGACAACTTCTCGCATTCAGCGAGTTTGTCAGCATTAACATACACTCTAGAATCTTCTA 11998 Query 1826 TGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGAGTCATTTT 1885 | ||||| ||||||||| ||| | || ||||| ||||| |||||||||||||| |||| Sbjct 11997 TTAGTTCAACAAGTCCCTCAGCTAGTTCACGATACTTTAGTGTCCATCTTGAGTCGTTTT 11938 Query 1886 CATCGTATTCTGGAGGTA 1903 |||| ||||| ||||||| Sbjct 11937 CATCATATTCAGGAGGTA 11920 Score = 98.7 bits (108), Expect = 4e-17 Identities = 253/384 (66%), Gaps = 3/384 (1%) Strand=Plus/Minus Query 1520 CTTGCATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTCTAATGTAATCCAACCTT 1579 ||| |||||| | || |||||||| |||||| ||| ||| | | ||||| | Sbjct 22050 CTTCCATTTTTTGTCGGATACTGTTTTGAATACATTCGTAATCTGTTATTTTCCAATTCT 21991 Query 1580 TCTCACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCTTGCAGTTTCATCTAATC 1639 ||| | || |||||| | ||| | | | ||| | | | ||||| ||||||||||| Sbjct 21990 GCTCTAGTCCATACTCTGCCACAAACTTCAACAATATTATCATTGCATGTTCATCTAATC 21931 Query 1640 CTGGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTCTTGACCCGGTTAATGAAC 1699 | ||||| | | || | | || ||| | | | || ||| | | | ||||| Sbjct 21930 CAGGTCTAACA-TTAATAC--CGTAATCCAGATCACTGACTGTTGCATCATTCACTGAAC 21874 Query 1700 AGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGC 1759 | || ||||||| | ||| || |||||| | ||| |||||| |||| | Sbjct 21873 ATATACTCAATGCGTTTGAAGTAAATATTTCGGTTAGTAATCTTCGAGCTAATGTCAAAC 21814 Query 1760 AATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTAT 1819 | || ||||| ||| ||||||| | | || || ||||| | ||| || || || Sbjct 21813 AGTCATTTGATAATGTCTTGCATTCAGCGAGTTTCTCAGCATTAACGTAAACTCCGGAAT 21754 Query 1820 GGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGAGT 1879 ||| ||||| |||||||| ||| ||||| ||||| ||||||||||| | Sbjct 21753 ATTCCATTAGTTCAACAAGTCCTTCAGCAGGCGCACGATACTTTAGTGTCCATCTTGAAT 21694 Query 1880 CATTTTCATCGTATTCTGGAGGTA 1903 ||||| | |||||||||||||||| Sbjct 21693 CATTTGCGTCGTATTCTGGAGGTA 21670 Score = 98.7 bits (108), Expect = 4e-17 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 1695 TGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGA 1754 |||||| | |||||||||| | |||| ||| | ||||| ||| ||||| | Sbjct 22346 TGAACATGTCCTCAATGCACTTGCTGAAAAAACTTCAATTAATAATAATTCAGCCAGTAT 22287 Query 1755 TTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATT 1814 ||| |||| |||||||| |||||| | | | ||| || ||||| | ||| || Sbjct 22286 TTTACAATTATTTGACAACCTCTTGTATTCAGCAAGTTTGTCAGCATTAACGTACACCCC 22227 Query 1815 GGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCT 1874 || ||| ||| ||||| |||||||| ||| | ||||| ||| | |||||||| Sbjct 22226 GGAATGTTCCATTAGTTCAACAAGTCCATCAGCAGGTGCACGATACTTCAGTGTCCATCT 22167 Query 1875 TGAGTCATTTTCATCGTATTCTGGAGG 1901 |||||||| | | |||||||||||||| Sbjct 22166 TGAGTCATGTGCGTCGTATTCTGGAGG 22140 Score = 96.9 bits (106), Expect = 1e-16 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 1694 ATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATG 1753 ||||||| | |||| || || ||||| || || ||| ||||| ||| |||||||| Sbjct 8940 ATGAACAAGTACTCAAAGCGCTTTTAGTAAAGATATCGGTTAATAATAATTGAGCCAATC 8881 Query 1754 ATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACAT 1813 |||| || | ||||| | | ||| | | ||| || || |||| || ||| Sbjct 8880 TGTTGCTGTCGCTCGACAAATTTTCGCATTCAGAAAGATTGTCAGCGTTGACATACACAC 8821 Query 1814 TGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATC 1873 || ||| || | ||| |||||||||||||| | ||||| ||||| |||||| Sbjct 8820 CGGAATGTTCTATTAATTCAACAAGTCCCGGAGCAGGCTCACGATACTTTAGAATCCATC 8761 Query 1874 TTGAGTCATTTTCATCGTATTCTGGAGG 1901 ||||||||| |||||| |||||||||| Sbjct 8760 TTGAGTCATATTCATCAAATTCTGGAGG 8733 Score = 91.5 bits (100), Expect = 6e-15 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 1719 AGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGCAATCTTTTGACAATCTCTT 1778 ||| |||||||| | ||||| | || |||||||| |||||| | | || |||||| Sbjct 23240 AGTAAAAATTTCAGTTAGTAACATTTGAATCAATGATTGGCAATCATACGCCAGTCTCTT 23181 Query 1779 GCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTATGGGGCATGAGTTCTACAAG 1838 ||| | | || || ||||| | | ||| | ||| ||| ||||| || || Sbjct 23180 GCACTCAGCGAGTTTGTCCGCATTAACAAACACACCAGAATGTTCCATTAGTTCAACCAG 23121 Query 1839 TCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGAGTCATTTTCATCGTATTCTGG 1898 |||| |||| | | ||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct 23120 TCCCAGAGCAGGCTCATGATACTTTAGTGTCCATCTTGAATCATTTTCATCATATTCTGG 23061 Query 1899 AGG 1901 ||| Sbjct 23060 AGG 23058 Score = 84.2 bits (92), Expect = 9e-13 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 1693 AATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAAT 1752 |||||||| ||| ||||||| | | ||||| | ||| | | ||| | | |||||| Sbjct 13015 AATGAACACGTGGCCAATGCAGTTGTTGTGAAGACTTCTATAAGCAACTTTTGGGCCAAT 12956 Query 1753 GATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACA 1812 | ||||| || |||| | |||||| | | || || ||||| | || ||| Sbjct 12955 GTCACACAATCCTTCGACACTTCCTTGCATTCAGCGAGTTTGTCAGCATTAACATATACA 12896 Query 1813 TTGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCAT 1872 | ||| ||| ||||| |||||| | ||||| | ||| | ||||| |||||| Sbjct 12895 CCGTAATGTTCCATTAGTTCAACAAGTTCAGGAGCAGGCTCACGGTACTTTAGTGTCCAT 12836 Query 1873 CTTGAGTCATTTTCATCGTATTCTGGAGG 1901 |||||||||||| | || ||||||||||| Sbjct 12835 CTTGAGTCATTTGCGTCATATTCTGGAGG 12807 Score = 82.4 bits (90), Expect = 3e-12 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 1759 CAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATG-GCATTGATGTAGACATTGGT 1817 || || || ||||||||||| || | ||| || ||||| || || | || | | || Sbjct 2173 CAGTCATTCGACAATCTCTTACATTCACTGAG-TTTATCAGCGTTAACATAAATACCGGA 2115 Query 1818 ATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGA 1877 ||| | ||||| ||||| |||||||| | ||||| ||| | ||||||||||| Sbjct 2114 ATGTTCTTTTAGTTCAACAAGACCCGGAGCAGGCTCACGATACTTAAGTGTCCATCTTGA 2055 Query 1878 GTCATTTTCATCGTATTCTGGAGG 1901 ||||||||| ||||||||||| || Sbjct 2054 GTCATTTTCTTCGTATTCTGGTGG 2031 Lambda K H 0.635 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20047609120076