Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2172 219 4e-52 seq84480 217 1e-51 seq4228 149 6e-31 seq1544 100 3e-16 seq5493 98.7 9e-16 seq4140 84.2 2e-11 >seq2172 Length=16819 Score = 219 bits (242), Expect = 4e-52 Identities = 353/505 (70%), Gaps = 2/505 (0%) Strand=Plus/Plus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 || ||||||| ||||| || ||||||||||| || || | || || ||||| || || Sbjct 7265 AAGGTCGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCTGAGGAAGTTTCCAGTTGAC 7324 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 || ||||| | ||||||||| | ||| |||| || || || || || || ||||| || Sbjct 7325 CGCGTGCCCATCCCTAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGA 7384 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 || || || |||||||| | || || || ||||| || ||| || || Sbjct 7385 GATGGTATCAACGACAGCTTGAAACAGATTGAAGGCAGTTTCCAAATTCTGCAAAAATCA 7444 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 || ||| | || ||||| |||||||| || ||||| || |||||||| | |||||| Sbjct 7445 TGCAGGGGCAGGGAAGACTTCAAAGTGTCAATCCATGATCCTTGGGCTGCTCTTCAGAAA 7504 Query 62279 CCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGATG 62338 |||||||| | || || |||||||| || ||||| || || || || || |||||| Sbjct 7505 CCACAAAAGGGTTTGACTGCCTGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATG 7564 Query 62339 GCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATTA 62398 |||| ||||| || || | || | | ||||| | || || ||||| | Sbjct 7565 ATGTTAAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCAGTTGGTGGATGGACCCTG 7624 Query 62399 TCCGATCCGTTCTTTTATTTTCA-CGATGTGGCCAAACGCAAGATTTTTGTCGATTCCGT 62457 ||||||| ||||| | | |||| ||| || || | || || |||| || || Sbjct 7625 GCCGATCCTTTCTTCT-TCTTCACCGACAAGGAAAAGAGAAACCGCTTCGTCGCCTCAGT 7683 Query 62458 CATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGAGTTTCC 62517 | || || | ||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct 7684 GAAGGACTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCC 7743 Query 62518 CGGCGGGAAAGGCGCCAATCCCAAC 62542 || || || || |||||||||||| Sbjct 7744 TGGTGGTAAGGGAGCCAATCCCAAC 7768 >seq84480 Length=6514 Score = 217 bits (240), Expect = 1e-51 Identities = 648/988 (66%), Gaps = 20/988 (2%) Strand=Plus/Plus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 || ||||||| ||||| || ||||||||||| || || || || || || || || || Sbjct 5423 AAGGTCGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCCGAGGAAGTTCCCCGTTGAC 5482 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 || ||||||| || |||||| | ||| |||| || || || || || || ||||| || Sbjct 5483 CGTGTGCCTATCCCCAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGA 5542 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 || ||||| ||||||||| | || || || ||||| ||||||| || | || Sbjct 5543 GATGGCATCAACGACAGTTTGAAAGAGATTGAAGGCAGTTTCCAAGCTCTGCAAAGATCA 5602 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 || || | || ||||| |||||||| || ||||| || |||||||| | |||||| Sbjct 5603 TGCAGCGGCAGGGAAGACTTCAAAGTGTCCATCCATGATCCTTGGGCTGCTCTTCAGAAA 5662 Query 62279 CCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGATG 62338 ||||| || | | |||||||| || ||||| || || || || || |||||| Sbjct 5663 CCACAGAAGGGTTTGGGTTCATGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATG 5722 Query 62339 GCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATTA 62398 |||| ||||| || || | || | | ||||| | || || ||||| | Sbjct 5723 ATGTTGAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCTGTTGGTGGATGGACCCTG 5782 Query 62399 TCCGATCCGTTCTTTTATTTTCAC-GATGTGGCCAAACGCAAGATTTTTGTCGATTCCGT 62457 ||||||| || || | | ||||| || || || | | || |||| || || Sbjct 5783 GCCGATCCCTTTTTCT-TCTTCACCGACAAGGAAAAGAGAAGCCGCTTCGTCGCCTCAGT 5841 Query 62458 CATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGAGTTTCC 62517 | || || | ||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct 5842 GAAGGACTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCC 5901 Query 62518 CGGCGGGAAAGGCGCCAATCCCAACGTAGGCGACGTCGAACGCGATCGCGAAACGTACAC 62577 || || || || ||||| ||| || |||| | |||| || || ||| ||| Sbjct 5902 TGGTGGTAAGGGAGCCAACCCCGACCTAGGTGGTCCCGAAGACGGTC---AAATCTACGT 5958 Query 62578 GATTCTGTTGAGAGATTTACGCGAAGCCCTCGACCG-TCTCTCAATCGAAAC-GAATCGA 62635 | ||| ||| || || | | || | || || || ||| | | || | | || Sbjct 5959 GCAGCTGATGAAGGAATTGAGAG-AGATGTTGAACGAGCTGTCAGCCAAGACTGGAAAGA 6017 Query 62636 ACGTACGAATTGACTAGCGCGATCAGCGCCGGCGATGACAAAATTGCCGTAGTCGATTAC 62695 | |||||| |||| || |||||| | || ||||| ||| || || || ||| Sbjct 6018 A-ATACGAACTGACCTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTTGTTGACTAC 6076 Query 62696 ACTGAAGCGCAAAAATATTTGGATTATAtttttttAATGACATACGATTTCAAAGGAGCT 62755 | | || || | || ||||| | || ||||| |||| ||||| ||||| || || Sbjct 6077 AAGGCCGCTCAGCAGTACATGGATCACATCTTTTTGATGAGCTACGACTTCAAGGGTGCC 6136 Query 62756 TGGTCGAATAGCGATTTGGGATATCAAACGACTCTGTACGCGCCTTCGTTTAACCCTAAA 62815 ||||| || | | || | || | ||| | || ||| | | |||| || Sbjct 6137 TGGTCCAACGACACGCTTGGCCACCAGGCTGGTCTACATGCCCCTGCATGGAACCGCAAG 6196 Query 62816 GAGCATTATACGACCGATTTTGCCGTT--CGTGCTAT--GCTCAAGCAAAAAGTCGAAAA 62871 ||| || || || || || | ||| | || | ||||||| |||| Sbjct 6197 GAGACATACACAACTGACTTCGGTGTTAAATTCCTCTTGGCTCAAG----GAGTCAGCCC 6252 Query 62872 CAAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGTTGGACCGGCGTCGGTGACTT 62931 ||| |||||| | ||||| || || |||||||| ||||||||||| || || | || Sbjct 6253 CAAGAAGATTGTCGTCGGTGTTGCTATGTACGGACGAGGTTGGACTGGAGTGAACGGCT- 6311 Query 62932 TGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAGGGACCGATCAAAGGTACCTGGGA 62991 | | || || ||||| | ||| |||| || || |||| || || ||| | Sbjct 6312 --ACAAGGATGGCAACCCATTCACTGGCGTAGCTACTGGCCCAGTCAAGGGAACATGGCA 6369 Query 62992 GGACGGAGTCGTCGATTATAGAGAGATT 63019 ||||||||| || || || ||||||||| Sbjct 6370 GGACGGAGTGGTGGACTACAGAGAGATT 6397 >seq4228 Length=62806 Score = 149 bits (164), Expect = 6e-31 Identities = 695/1080 (64%), Gaps = 29/1080 (3%) Strand=Plus/Minus Query 147450 TGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTA 147509 || ||||| |||||||| |||| ||||||| || | || | ||| | || ||| Sbjct 19755 TGATGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGTATATGTTTGATGTA 19696 Query 147510 AACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAA 147569 || || || || || || || || || | |||||||| || | || || ||||| Sbjct 19695 AAAGGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAGCAGTTGGCATAGGT 19636 Query 147570 GCAATCAATAATGAATTGCGTAAG-CCGTGCATAGCCAT-TTCTCGCTTAAGCTCGTCCC 147627 || | ||||| |||||| | |||| || || | || || ||||| ||| | |||| Sbjct 19635 GCTAGCAATAGTGAATTTC-TAAGACCATGTTTTGCAATCTTCTCTTTTA-GTGAATCCC 19578 Query 147628 AGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAAC 147687 ||| ||| | ||| | | || | | ||||||| ||| |||| || | || | Sbjct 19577 AGTCCCACAAATCTGTTG---GGGTCTTGTTCCACATGTCATACTGCAATATACCTTGGC 19521 Query 147688 TTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTT 147747 |||||||||| || || |||| || ||| ||| ||| | |||| ||| | | | Sbjct 19520 TTGCAGGGCTGCCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAATTC-ACAGCTA 19462 Query 147748 GACTT-AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCT 147806 | || ||||||||||| || || ||||| | || | || |||||| | | |||| || Sbjct 19461 GCCTCCAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTAATTTTATAGCAGCT 19402 Query 147807 TGGCTGTCGTAGGGCATATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATA 147866 | ||| || || || || || | | || | ||| || | |||||||| || || Sbjct 19401 TCGCTTTCATATGGTATGCGCATTAAAACAAAAGCATCAGCTAATCCTTGAACTCCAATT 19342 Query 147867 CCGATGGGTCGGTGTCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAG 147926 || ||||||| ||| || | ||| ||| || || | || || ||||| |||| Sbjct 19341 CCAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCACTGGGTAAAAGTTCACA 19282 Query 147927 TCGATAATTTTATTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAG 147986 || |||||||| || ||||| | || | | ||| || | | | |||| Sbjct 19281 TCAATAATTTTGTTCAGATTCTCAGTTATAGTTTTAGTGACTTCTTTCAATTTGATAAAA 19222 Query 147987 TCGAAGCTTTTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACAC 148046 | | | ||||| | | ||| |||| |||||| ||||| || || || || || Sbjct 19221 TTGTATGTTTTA---TCATCATTTACAAACATATTTAATGCAATTGAAGCTAAATTGCAG 19165 Query 148047 ACGGCCGTTTC-TCGATTGTCGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCG 148105 || || ||| || || | |||||| || ||||| | || || |||||| | Sbjct 19164 ACAGCAACTTCATCTGCTGAAG-TATATTCTACAATTTCAGTGCAAAGGTTGCTGCATTT 19106 Query 148106 AATCACTCCCTCG-tttttttGATTATTTTTATTGTTAACGTG-ATCTTTAAACATCATG 148163 ||| | ||| | || || || ||| |||| |||| | || ||||||| | | |||| Sbjct 19105 AAT-GGTGCCTAGATTCTTCTGGTTACTTTTTCTGTT-GCATGAATCTTTATAAAGCATG 19048 Query 148164 TATGGAGCTCCGGTCTCGACTTGAGTCTCAATAAT--TTTTCTATGAAGATCTAAAGCCG 148221 ||||| | ||| || || ||||| | ||||| || |||| | || | || ||| Sbjct 19047 TATGGTGTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCA-CAAAACCT-GAGCTC 18990 Query 148222 AAATTTGTTTTTTAAACTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTT 148281 | ||||||| ||| ||||| || || || || || | | || ||||||| Sbjct 18989 GCACTTGTTTTACAAAGCGACCTTCCTGTTCATATTTCTCATACAATGCTTCAAATTCTT 18930 Query 148282 GGCCATAGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTC 148341 || | |||||| |||||| || || || | || ||||| | ||| | | | Sbjct 18929 CTCCCCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTCCAAT--CTTG 18872 Query 148342 CTGTCTTT--ACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCG 148399 | |||| || || |||||||| | ||| ||| |||| | |||| ||| || || | Sbjct 18871 ATTACTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGTTCCCT 18812 Query 148400 AGCCTTCATATCCTCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGC 148459 ||| | || || || |||| || | ||||| ||| ||| | ||| || Sbjct 18811 AGCACGTACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATGTCAGC 18752 Query 148460 GTGCCAAGGCTCGATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGAC 148516 ||||| || || | |||| || | ||||| | | | ||||||||||||||||| Sbjct 18751 ATGCCATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGATCGAC 18692 >seq1544 Length=14195 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| || ||||| ||| | |||||| | ||| | || | Sbjct 3258 ATGCAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCT 3199 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| ||| | ||||| |||||| ||||| ||||| || || || || || Sbjct 3198 GATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 3139 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || |||| || ||||||||| | ||||||| | | | | ||||| ||| Sbjct 3138 CAGCGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACCCTTTCTGACTACAAC 3079 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || ||||||||||| ||| |||| ||||| || Sbjct 3078 ATCCAAAAAGAATCCACTCTCCACTTGGTCTTG 3046 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| || | |||||| |||| | ||| | Sbjct 5082 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAACCTTCT 5023 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | ||||| |||||| || || ||||| || ||||| || || Sbjct 5022 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAAGGCATCCCTCCAGACCAG 4963 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| || | || ||||||||||| ||||||| | | | | || || || ||| Sbjct 4962 CAGCGACTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGTACCCTCTCTGATTACAAC 4903 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || ||||| ||| ||||||| || ||| | || | ||||| Sbjct 4902 ATCCAGAAGGAATCCACTCTCCATCTTGTACTGCGTCTCCGTGGAGG 4856 >seq5493 Length=1642780 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 ||||| ||||| || ||||| | || ||| || || || || || || || ||| Sbjct 959398 ACGCACGATGACCTGTGGAACTCGGCGCAGATCCAACTGGTGAAAGAAGGAAAGATGCAC 959339 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | ||| ||||||||||||||||| || || || |||||||||| || |||||| | Sbjct 959338 GGCTTCCTGCGCATGTACTGGGCCAAGAAAATACTGGAGTGGACTCCGACGCCCGAGGAC 959279 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 |||||| ||||| | || || | || ||| ||||| |||| || | || || | Sbjct 959278 GCGCTCAAGTATGCGATATACTTGAATGATCATTACAGCATCGATGGGAGGGACCCCAGT 959219 Query 71852 GGTTATGTCGGT 71863 || ||||| ||| Sbjct 959218 GGATATGTTGGT 959207 >seq4140 Length=56097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 162/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||| |||||| | || |||||||| | || || ||| | |||||| |||| | || Sbjct 50215 ACACAATGCAGATCTTCGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTGGAGG 50274 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | ||||| || ||| | |||||| |||||| ||||| || || || || || | Sbjct 50275 CTTCAGACACTATTGAGAATGTCAAAGCAAAGATCCAGGACAAGGAGGGAATCCCACCAG 50334 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 |||| || |||| || | || || ||||| | || |||| | | | |||| Sbjct 50335 ATCAGCAGCGACTTATCTTCGCTGGTAAACAGTTGGAGGATGGCCGCACTCTTTCTGACT 50394 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAATA 27002 | ||||| || || ||||| || | || |||| || || ||||||||||| || ||| Sbjct 50395 ACAACATCCAGAAGGAATCCACCCTTCACTTGGTGCTTAGGCTTAGAGGAGGTAAGATA 50453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478143176944880