Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4228 107 5e-18 >seq4228 Length=62806 Score = 107 bits (118), Expect = 5e-18 Identities = 436/677 (64%), Gaps = 10/677 (1%) Strand=Plus/Plus Query 363591 TCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTT 363650 ||| || ||||||||||||| ||| || ||||| || ||| || || || || | Sbjct 18472 TCCTCAACTGTCTTCTTGCTTCCTTATAGCCATGAAAGATGATAGTATTGAAGGAATTTA 18531 Query 363651 TGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGAT 363710 ||| || || || | ||||| || ||||| || ||||| || ||||| | | Sbjct 18532 TGATACTCTAAAACAATGTGCACTAATTTCTAAATCAGCAGGTGGGATTGGCCTCCATGT 18591 Query 363711 CCACAATGTTCG-TGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||| | || | | || || | ||| || || ||| || |||||||| | Sbjct 18592 TCACTGTATTAGATCCAAAGGT-ACTTATATAGCTGGTACAAATGGTGTGTCGAATGGTC 18650 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGG 363827 | || || ||| | | || | |||| || ||| | |||||||| || || || | Sbjct 18651 TTGTGCCGATGTTAAGAGTTTACAACAACACAGCGCGTTACGTCGATCAAGGAGGTAATA 18710 Query 363828 AAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTT 363887 |||| | || || ||||| || ||| | || || ||||| || || ||||| || Sbjct 18711 AAAGACCT--GGCGCATTTGCCATATATTTGGAACCATGGCATGCTGACATATTTGAATT 18768 Query 363888 TCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947 ||| || | || || || || ||||| ||| | ||||| | || ||||| ||||| Sbjct 18769 TCTGGATTTGAAAAAGAATACTGGGAAAGAAGAAGTACGTGCTAGGGAACTGTTTTATGC 18828 Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCT 364006 | ||| | | || |||||||| | || || | | |||| |||| | Sbjct 18829 CTTATGGATACCAGATTTATTTATGAAAAGAGTTGAAAGTAATCAAGA-TTGGAGTATAA 18887 Query 364007 TTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTAT 364066 | || || || || || || ||| | |||||| ||||| || || | || || | | Sbjct 18888 TGTGTCCTCATGATTGCCCTGGTTTATCCGATTGTTGGGGAGAAGAATTTGAAGCATTGT 18947 Query 364067 ACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCC-GCACAGAAGCTATGG 364125 | || || |||||| ||| || | | |||| |||| | | || ||| | ||| Sbjct 18948 ATGAGAAATATGAACAGGAAGGTC-GCTTTGTAAAACAAGTGCGAGCTCAGGTTTTGTGG 19006 Query 364126 TTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCG 364185 || || || || | || |||| ||||||||||| || ||| | || |||||||| Sbjct 19007 AAAGCTATAATTGAAGCACAAGTTGAAACAGGAACACCATACATGCTTTATAAAGATTCA 19066 Query 364186 TGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACC 364245 |||||| | || |||||| || | || || || ||| | |||||||| || || Sbjct 19067 TGCAACAGAAAAAGTAACCAGAAGAATCTAGGCACCATTAAATGCAGCAACCTTTGCACT 19126 Query 364246 GAGATTATTGAATACAC 364262 || ||| | ||||| || Sbjct 19127 GAAATTGTAGAATATAC 19143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301904458561178