Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq84480 203 3e-47 seq2172 176 4e-39 seq4134 154 1e-32 seq1544 82.4 6e-11 >seq84480 Length=6514 Score = 203 bits (224), Expect = 3e-47 Identities = 344/496 (69%), Gaps = 2/496 (0%) Strand=Plus/Plus Query 32170 CGTCGCTGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGT 32229 ||| | ||| || || || |||||||| || ||| | | || ||||| | ||| || Sbjct 5428 CGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCCGAGGAAGTTCCCCGTTGACCGTGT 5487 Query 32230 GCCGTTGCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGG 32289 ||| | |||||| | | ||||| | ||||| || || || |||||||| || || || Sbjct 5488 GCCTATCCCCAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGG 5547 Query 32290 ACTAAACGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAA 32349 | ||||| | ||| ||| |||||||| | || |||||| | || |||| Sbjct 5548 CATCAACGACAGTTTGAAAGAGATTGAAGGCAGTTTCCAAGCTCTGCAAAGATCATGCAG 5607 Query 32350 AGGCCGCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCA 32409 ||| | | |||||| || || |||| || || |||||||| || | || ||||| || Sbjct 5608 CGGCAGGGAAGACTTCAAAGTGTCCATCCATGATCCTTGGGCTGCTCTTCAGAAACCACA 5667 Query 32410 GAAGGGCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGC 32469 |||||| || | | |||||||| || ||||| |||||||| ||||| |||||| | Sbjct 5668 GAAGGGTTTGGGTTCATGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTT 5727 Query 32470 CAAGTTGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGA 32529 || ||| | || || | || || | || ||| |||| || ||||| || | || Sbjct 5728 GAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCTGTTGGTGGATGGACCCTGGCCGA 5787 Query 32530 TCCCTTTTATTTTATGCAC-GACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAG 32588 |||||||| | || | ||| ||| |||||| | | || |||| || || || | Sbjct 5788 TCCCTTTT-TCTTCTTCACCGACAAGGAAAAGAGAAGCCGCTTCGTCGCCTCAGTGAAGG 5846 Query 32589 AGTTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCG 32648 | || | || ||||||||||| || || || |||||||||||||||||||| || | Sbjct 5847 ACTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTG 5906 Query 32649 GCAAAGGTGCCAACCC 32664 | || || |||||||| Sbjct 5907 GTAAGGGAGCCAACCC 5922 >seq2172 Length=16819 Score = 176 bits (194), Expect = 4e-39 Identities = 338/496 (68%), Gaps = 2/496 (0%) Strand=Plus/Plus Query 32170 CGTCGCTGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGT 32229 ||| | ||| || || || |||||||| || ||| | | || || ||| | ||| || Sbjct 7270 CGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCTGAGGAAGTTTCCAGTTGACCGCGT 7329 Query 32230 GCCGTTGCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGG 32289 ||| | || ||| | | ||||| | ||||| || || || |||||||| || || || Sbjct 7330 GCCCATCCCTAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGG 7389 Query 32290 ACTAAACGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAA 32349 | ||||| | | ||| ||| |||||||| | |||||| || |||| Sbjct 7390 TATCAACGACAGCTTGAAACAGATTGAAGGCAGTTTCCAAATTCTGCAAAAATCATGCAG 7449 Query 32350 AGGCCGCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCA 32409 ||| | | |||||| || || | || || || |||||||| || | || ||||| || Sbjct 7450 GGGCAGGGAAGACTTCAAAGTGTCAATCCATGATCCTTGGGCTGCTCTTCAGAAACCACA 7509 Query 32410 GAAGGGCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGC 32469 ||||| || |||| |||||||| || ||||| |||||||| ||||| |||||| | Sbjct 7510 AAAGGGTTTGACTGCCTGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTT 7569 Query 32470 CAAGTTGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGA 32529 || ||| | || || | || || | || || |||| || ||||| || | || Sbjct 7570 AAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCAGTTGGTGGATGGACCCTGGCCGA 7629 Query 32530 TCCCTTTTATTTTATGCAC-GACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAG 32588 ||| || | | || | ||| ||| |||||| | || || |||| || || || | Sbjct 7630 TCCTTTCT-TCTTCTTCACCGACAAGGAAAAGAGAAACCGCTTCGTCGCCTCAGTGAAGG 7688 Query 32589 AGTTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCG 32648 | || | || ||||||||||| || || || |||||||||||||||||||| || | Sbjct 7689 ACTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTG 7748 Query 32649 GCAAAGGTGCCAACCC 32664 | || || ||||| || Sbjct 7749 GTAAGGGAGCCAATCC 7764 >seq4134 Length=55171 Score = 154 bits (170), Expect = 1e-32 Identities = 201/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 109222 CCCGTGCATCCCAAATACGCAACGGAAGTTGCACGTTTGCGCACTTTTGCAGAATGGCCT 109281 |||||||| ||| |||| | |||| || || |||||| ||| ||| |||||| Sbjct 48363 CCCGTGCACCCCCGCTACGTGTCCGAAGCCGCTCGGCTGCGCAGTTTCCAAGACTGGCCT 48422 Query 109282 CGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAGGCCGGGTTTTATTACACGGGCCAG 109341 | | |||||||| |||| || | || |||||||| || || | || || || || Sbjct 48423 AGATGCATGAAACAGAAACCTGAGGAGCTCGCCGAGGCAGGCTTCTTCTATACCGGTCAA 48482 Query 109342 GGCGATAAAACCAAATGTTTTTATTGTGACGGCGGTTTGAAAGACTGGGAGGCGGACGAT 109401 || || || || ||||| ||||| || || || || ||||||||||||||| || || Sbjct 48483 GGTGACAAGACTAAATGCTTTTACTGCGATGGAGGCTTGAAAGACTGGGAGAACGATGAC 48542 Query 109402 GAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGTTGCCCTTACGTGTTGCTTGTTAAG 109461 | ||||||| | | ||||||||||||||| ||||| ||| | |||||| ||| || ||| Sbjct 48543 GTGCCGTGGGAGCAGCACGCGCGTTGGTTCGACCGCTGCGCCTACGTGCAGCTGGTGAAG 48602 Query 109462 GGTCGAGATTATGTGCAAAAAATTGTAACGGAATCGTG 109499 ||||| || || || || || | | ||||| |||| Sbjct 48603 GGTCGCGAGTACGTCCAGAAGGTGATGACGGAGGCGTG 48640 >seq1544 Length=14195 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| | || || |||||||| ||| | ||| ||| || Sbjct 3258 ATGCAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCT 3199 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || || ||| || || |||||| ||||| || ||| Sbjct 3198 GATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 3139 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||||| || |||||||| || ||||||| ||| | | || || ||| Sbjct 3138 CAGCGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACCCTTTCTGACTACAAC 3079 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || |||||||| || ||| | || |||| ||| Sbjct 3078 ATCCAAAAAGAATCCACTCTCCACTTGGTCTTG 3046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424894148077480