Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_007987.1 Length=6567 Score E Sequences producing significant alignments: (Bits) Value seq1341 84.2 9e-13 >seq1341 Length=13534 Score = 84.2 bits (92), Expect = 9e-13 Identities = 182/267 (68%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 1124 TTTCAAGAACTACTAGAGCGGCTGTCAATACGCAAATTCAAAGCAAAATTTTATAACCGG 1183 ||| ||||||||| || | || |||| || |||| |||| | || |||| || Sbjct 4808 TTTTAAGAACTACGGGAACAACTATCAACACCATAATTTCAAGCCACTTTGCTTAACGGG 4867 Query 1184 GAAGAAATAGAAGTGGAATACAAGTTCGACAGGGAGAGAAGTGGAATAAATTGGATTCTT 1243 ||||||||||| ||||||| | | |||| ||||||| | | | | | | | Sbjct 4868 AAAGAAATAGAAATGGAATATACCTACGACTGGGAGAGGTTTTGTAGAGACCGTGTCAAA 4927 Query 1244 ATCAA--TTTCAAAGACTTGTTACCAATACTTGGTGGGATTATGCTACCAGATGATGAAG 1301 || || |||||||| ||||| ||||| |||||||||| ||| |||| |||| | || Sbjct 4928 ATTAATTTTTCAAAG-TTTGTTGGCAATATTTGGTGGGATCATGTTACCCGATG--GGAG 4984 Query 1302 ATAAATTCCAGAGCATATTCACGCTAGAAGATTTTTTGAAAAGAAACCTGAAGGTACATC 1361 | ||||| | ||||| | ||| |||| ||||||| ||||| | | ||||| Sbjct 4985 A-AAATTTGGTGGTTTATTCGAAGTGGAAAATTTATTGAAAACAAACCCGGATTTACATG 5043 Query 1362 GGTGTTCAGGGGGAATACATACATCCT 1388 || ||| | ||||| |||||| || Sbjct 5044 AGTTTTCGGACGGAAT--ATACATACT 5068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20878796868636