Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_008002.1 Length=19557 Score E Sequences producing significant alignments: (Bits) Value seq5462 118 1e-22 >seq5462 Length=1053975 Score = 118 bits (130), Expect = 1e-22 Identities = 179/252 (71%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 19227 GGTAACAAATAGTCCACATTGATGAGAAGTCGATCTTCTGCTCTTCTCGCGGGATCGAAG 19286 ||||||||||||||| ||||| ||||| |||||||| | ||| | | |||| || Sbjct 826456 GGTAACAAATAGTCCCAATTGAGGAGAATGTGATCTTCTTTTGGTCTTGAGATATCGTAG 826515 Query 19287 TTATATTCCACTTGCAATTGTTTTCCGTTCAGGAACTCAGTTTCACAT-TGGTAGGTTGA 19345 || ||||| | | ||| | |||||||| | |||| | || || | || || || Sbjct 826516 TTGTATTCTATATCCAACTCCTTTCCGTTGATAAACT-TGACTCGGATCTTGTGAGTAGA 826574 Query 19346 GAGTTTCCACAGCTCCCTTCGGACCATGTCACATTCGTCGTTGTTGGGCCAAAGTGATTG 19405 |||| ||| || | ||||| || || ||||||| ||| | ||||||||| ||| | Sbjct 826575 AAGTTCCCAGAGTTTTCTTCGAACAGATTCGCATTCGTTGTTATCGGGCCAAAGCGATCG 826634 Query 19406 GATGAAGCTCCGATAATCTTCGAATTTCATAAATTTCGCCATGTAGAGAATCATTTCCAA 19465 |||||| | || ||||| || | |||||| |||||||||| ||||| ||||| Sbjct 826635 GATGAAATTTTTGTAGTCTTCAAAACGGAGAAATTTGCCCATGTAGAGTATCATGTCCAA 826694 Query 19466 CGGTAAAACAAT 19477 |||||| |||| Sbjct 826695 TGGTAAATCAAT 826706 Score = 109 bits (120), Expect = 7e-20 Identities = 177/252 (70%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 17644 GGCAACAAATAGTCCACATTGATGAGAAGTCGATCTTCTGCTCTTCTCGCGGGATCGAAG 17703 || |||||||||||| ||||| ||||| |||||||| | ||| | | |||| || Sbjct 826456 GGTAACAAATAGTCCCAATTGAGGAGAATGTGATCTTCTTTTGGTCTTGAGATATCGTAG 826515 Query 17704 TTATATTCCACTTGCAATTGGTTTCCGTTCAGGAACTCAGTTTCACAT-TGGTAGGTTGA 17762 || ||||| | | ||| | |||||||| | |||| | || || | || || || Sbjct 826516 TTGTATTCTATATCCAACTCCTTTCCGTTGATAAACT-TGACTCGGATCTTGTGAGTAGA 826574 Query 17763 GAGTTTCCACAGCTCCCTTCGGACCATGTCACATTCGTCGTTGTTGGGCCAAAGTGATTG 17822 |||| ||| || | ||||| || || ||||||| ||| | ||||||||| ||| | Sbjct 826575 AAGTTCCCAGAGTTTTCTTCGAACAGATTCGCATTCGTTGTTATCGGGCCAAAGCGATCG 826634 Query 17823 GATGAAGCTCCGATAATCTTCGAATTTCATAAATTTCGCCATGTAGAGAATCATTTCTAA 17882 |||||| | || ||||| || | |||||| |||||||||| ||||| || || Sbjct 826635 GATGAAATTTTTGTAGTCTTCAAAACGGAGAAATTTGCCCATGTAGAGTATCATGTCCAA 826694 Query 17883 CGGTAAAACAAT 17894 |||||| |||| Sbjct 826695 TGGTAAATCAAT 826706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 62401324735040