Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_008007.1 Length=15812 Score E Sequences producing significant alignments: (Bits) Value seq5462 145 8e-31 >seq5462 Length=1053975 Score = 145 bits (160), Expect = 8e-31 Identities = 186/254 (73%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 2787 CGAACACAGGCAACAAGGAGTCATAATTAATGAGAACGCGATCTTCCTTTATTCTTGAAG 2846 |||||| ||| ||||| |||| |||| | ||||| | ||||||| ||| |||||| Sbjct 826448 CGAACATAGGTAACAAATAGTCCCAATTGAGGAGAATGTGATCTTCTTTTGGTCTTGAGA 826507 Query 2847 AATCGAAGTTGTATTCAATCGCCAATGGTTTTCCATTTATAAACATCGATGCACA-CTGG 2905 |||| |||||||||| || |||| ||||| || |||||| | || | | || | Sbjct 826508 TATCGTAGTTGTATTCTATATCCAACTCCTTTCCGTTGATAAACTT-GACTCGGATCTTG 826566 Query 2906 TAAGTAGATAGTTGCCATAATTTTTCTCGAAAATAATCGCTTTCATTACCATGGGGCCAA 2965 | |||||| |||| ||| | |||| ||||| | | |||| ||| || || ||||||| Sbjct 826567 TGAGTAGAAAGTTCCCAGAGTTTTCTTCGAACAGATTCGCATTCGTTGTTATCGGGCCAA 826626 Query 2966 AGCGAGCGGATGAAACATCGATAATCTTCAAAACACAGAAAGTTCGCCATGTATAGAATC 3025 ||||| ||||||||| | || |||||||||| ||||| || ||||||| || ||| Sbjct 826627 AGCGATCGGATGAAATTTTTGTAGTCTTCAAAACGGAGAAATTTGCCCATGTAGAGTATC 826686 Query 3026 AGCTCCAGCGGTAA 3039 | |||| ||||| Sbjct 826687 ATGTCCAATGGTAA 826700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50429349267175