Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq2172 307 1e-78 seq84480 293 3e-74 seq4134 104 3e-17 >seq2172 Length=16819 Score = 307 bits (340), Expect = 1e-78 Identities = 598/874 (68%), Gaps = 23/874 (3%) Strand=Plus/Minus Query 51575 CCAGCCGCGAGCGTACATCGCCACGCCGACGACGATCTTCTGATTGCGCACGCCCTGTTC 51634 |||||| | | ||||| || || || ||||||||||||| || || || || | Sbjct 8137 CCAGCCTCTTCCATACATGGCAACACCAACGACGATCTTCTTGGAGCTGACTCCTTGAGC 8078 Query 51635 GAGAAGCGAC--GACACGGCATAGTCGGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGC 51692 | || || ||||| | | ||| || ||||| | ||| | |||||||| || Sbjct 8077 CAAGAGAGATTTGACACCGAA--GTCAGTTGTGTATGTCTCGCTGCGGTTCCATGTAGGG 8020 Query 51693 GCGAACAGTGTGGTCTGGTAGCCCAGATCGGTGTTGGACCACGCACCCTTGAAATCGTAG 51752 ||| || | |||| ||| ||| | |||||||||| | ||||||||| |||||| Sbjct 8019 GCGTGTAGACCAGAATGGTGGCCAAGAGCATTGTTGGACCAGGAACCCTTGAAGTCGTAG 7960 Query 51753 TTCATGAGGAAAATGTAATCCA---ACTGCGTCTGCGCCCGAGCGTAGTCGACGACTTGA 51809 |||| | ||| || | |||| ||||| | ||| || | ||||| ||||| ||| Sbjct 7959 CTCATCAAGAAGATATGGTCCATGTACTGC-TGAGCGGCCTTG--TAGTCTACGACCTGA 7903 Query 51810 ATTTTATCGTAGCCCGCGCTGATGGCGCTGGTCAACAGGTA---CGAACGGTTCGTGGCG 51866 || || || | || ||||||||||| ||||| ||| | | || |||| Sbjct 7902 ATCTTGTCCCAACCAGCGCTGATGGCTGAGGTCAGTTCGTATTTCTTTCCAGTCTTGGCT 7843 Query 51867 GCGCTCAACTCGTCGAGCATGTCGCGCAGCTCGGTCAAAAGCGTCACGTACGTCGCACCA 51926 | || ||||| | ||| || | || || ||| ||| ||||| | ||| Sbjct 7842 GA---CAGCTCGTTCAACATTTCTCTCAATTCCTTCATCAGCTGGACGTAGATGTGACCG 7786 Query 51927 TCGCGATCGGGATCGCCCAGGTCGGGATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCG 51986 || |||||| | || |||| ||||||||| || || || || || |||||||| || Sbjct 7785 TCT---TCGGGACCACCAAGGTTGGGATTGGCTCCCTTACCACCAGGGAACTCCCAATCA 7729 Query 51987 ACGTCGACTCCGTCGAAGAACTTCCAAGTCAGCAGAAACTCGCGAACCGATTCGACGAAG 52046 | ||| || || |||||||| ||||| ||| || || || || || |||||||| Sbjct 7728 ATGTCAACACCATCGAAGAATTTCCAGGTCTCGAGGAAGTCCTTCACTGAGGCGACGAAG 7669 Query 52047 --GTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAAGAACGGATCGGACAGCGTCCAACCGC 52104 ||| | | ||| || | ||| | ||||||||| ||||||| ||| ||||| || | Sbjct 7668 CGGTTTCTCTTTTCCTTG--TCGGTGAAGAAGAAGAAAGGATCGGCCAGGGTCCATCCAC 7611 Query 52105 CGATCGAGGGCAGAATCTTGAGCGAAGGATTGGCCCGTTTGGCCGCCATCAGCTGTCCAA 52164 | | || || || ||||| || || | ||| |||| | ||||| ||| || | Sbjct 7610 CAACTGAAGGAAGGATCTTCAGGTCTGGTCTCGCCTGTTTTAACATCATCAACTGGCCGA 7551 Query 52165 AGTTTCCCTTGTACGGATCGTTCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCG 52224 |||| |||||||| || ||||||||||| | | || || || |||||||| || || | Sbjct 7550 AGTTGCCCTTGTAAGGCTCGTTCCAGGCAGTCAAACCCTTTTGTGGTTTCTGAAGAGCAG 7491 Query 52225 CCCAGGGATCGTGAATCGTCACCTTAAAGTCCGACCTGCCCACGCACGACCGTTGCAACG 52284 |||| ||||| || || | ||| || ||||| ||||||| ||| || ||||| Sbjct 7490 CCCAAGGATCATGGATTGACACTTTGAAGTCTTCCCTGCCCCTGCATGATTTTTGCAGAA 7431 Query 52285 CTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGG 52344 || ||||||| || ||| |||||| |||||||||||| || || || ||||| || | Sbjct 7430 TTTGGAAACTGCCTTCAATCTGTTTCAAGCTGTCGTTGATACCATCTCCACCGCAAATTG 7371 Query 52345 GAATGAAGCCGTACAGCAGATGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGT 52404 | ||||| ||||| || ||||| | || || || | ||||| | || || ||||| | Sbjct 7370 GGATGAAACCGTAAAGAAGATGAGTTAGATTAGGGATGGGCACGCGGTCAACTGGAAACT 7311 Query 52405 TGCGCAAGTAAACGCCCCATTCGACAAAGTAGGC 52438 | | || ||| || ||||||||||| ||||| || Sbjct 7310 TCCTCAGGTAGACACCCCATTCGACGAAGTATGC 7277 >seq84480 Length=6514 Score = 293 bits (324), Expect = 3e-74 Identities = 670/994 (67%), Gaps = 31/994 (3%) Strand=Plus/Minus Query 51557 GTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCCGACGACGATCTTCTG 51616 ||||||| |||| | ||| || || ||||||| || || |||||||| ||||||| Sbjct 6313 GTAGCCGTTCACTCCAGTCCAACCTCGTCCGTACATAGCAACACCGACGACAATCTTCTT 6254 Query 51617 ATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTCGGTGGTGTACTTTTCGTC 51676 || || || || | | || | || | |||| || ||||| | || | Sbjct 6253 GGGGCTGACTCCTTGAGCCAAGAGGAATTTAACACCGAAGTCAGTTGTGTATGTCTCCTT 6194 Query 51677 GGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAGATCGGTGTTGGACCACGC 51736 | |||||||| || || || | ||||| ||| || | ||||||||| || Sbjct 6193 GCGGTTCCATGCAGGGGCATGTAGACCAGCCTGGTGGCCAAGCGTGTCGTTGGACCAGGC 6134 Query 51737 ACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCA---ACTGCGTCTGCGCCCGAGC 51793 ||||||||| |||||| |||| | || |||| ||||| ||||| | ||| || | Sbjct 6133 ACCCTTGAAGTCGTAGCTCATCAAAAAGATGTGATCCATGTACTGC-TGAGCGGCCTTG- 6076 Query 51794 GTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCTGGTCAACAGGTA--- 51850 ||||| || || ||||| || || | || | ||||||||| ||||| ||| Sbjct 6075 -TAGTCAACAACCTGAATCTTGTCCCAACCAGAGCTGATGGCTGAGGTCAGTTCGTATTT 6017 Query 51851 CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGCTCGGTCAAAAGCGT 51910 | | || |||| | || ||||| | ||| || | || || ||| ||| Sbjct 6016 CTTTCCAGTCTTGGCTGA---CAGCTCGTTCAACATCTCTCTCAATTCCTTCATCAGCTG 5960 Query 51911 CACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGATTGGCGCCTTTGCCGCC 51970 |||||| | ||| || |||||| | || |||||||| ||||| || || || || Sbjct 5959 CACGTAGATTTGACCGTCT---TCGGGACCACCTAGGTCGGGGTTGGCTCCCTTACCACC 5903 Query 51971 CGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTCAGCAGAAACTCGCG 52030 || |||||||| || | ||| || || |||||||| ||||| ||| || || || Sbjct 5902 AGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAGGTCTCGAGGAAGTCCTT 5843 Query 52031 AACCGATTCGACGAAG--GTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAAGAACGGATCG 52088 || || |||||||| | | | | ||| || | ||| | |||||| || |||||| Sbjct 5842 CACTGAGGCGACGAAGCGGCTTCTCTTTTCCTTG--TCGGTGAAGAAGAAAAAGGGATCG 5785 Query 52089 GACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTGGCCCGTTTGGCC 52148 | ||| ||||| || || | || || || ||||| || || | ||| |||| | Sbjct 5784 GCCAGGGTCCATCCACCAACAGAAGGAAGGATCTTCAGGTCTGGTCTCGCCTGTTTCAAC 5725 Query 52149 GCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGG--CCGAGACGCCTTTCT 52206 ||||| ||| || ||||| |||||||| || |||||||| | || | || | |||| Sbjct 5724 ATCATCAACTGGCCGAAGTTGCCCTTGTAAGGCTCGTTCCATGAACCCAAACCC--TTCT 5667 Query 52207 GCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGACCTGCCCA 52266 | |||||||| || || ||||| ||||| || || | ||| || ||||| |||||| Sbjct 5666 GTGGTTTCTGAAGAGCAGCCCAAGGATCATGGATGGACACTTTGAAGTCTTCCCTGCCGC 5607 Query 52267 CGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTCGTTGATGC 52326 ||| || | ||||| |||| ||||||| || ||| ||||| ||||||||||||| Sbjct 5606 TGCATGATCTTTGCAGAGCTTGGAAACTGCCTTCAATCTCTTTCAAACTGTCGTTGATGC 5547 Query 52327 CGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGGCAACGGCA 52386 | || || ||||| || || ||||| ||||| || ||||| | || || || | |||| Sbjct 5546 CATCTCCACCGCAAATTGGGATGAAACCGTAAAGAAGATGAGTTAGATTGGGGATAGGCA 5487 Query 52387 CCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTAGGCCGCTTTCA 52446 | | || ||||| || || | | ||| || ||||||||||| ||||| || | | Sbjct 5486 CACGGTCAACGGGGAACTTCCTCGGGTAGACACCCCATTCGACGAAGTATGCACCAACGA 5427 Query 52447 CGGTGCCCGACGTGTCGACGTAGGGCAGATTGTT-TTCGCGCCACTCG--TAGT-TGAGG 52502 | | || || || | | ||||| ||||| || | || | | |||| ||| Sbjct 5426 CCTTTCCAGAAGTCTGCTTGAAGGGC---TTGTTCCTCTCTCCGATAGAATAGTCCAAGG 5370 Query 52503 GCGGCCAGATGGCTACCGTCCGTGTCGGCCACCA 52536 |||| |||||||||||| || || ||||| |||| Sbjct 5369 GCGG-CAGATGGCTACCATCAGTATCGGCTACCA 5337 >seq4134 Length=55171 Score = 104 bits (114), Expect = 3e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 38440 AATACTGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACT 38499 || ||||||| | ||||||| |||| || | || | |||||||| ||||||| || Sbjct 48412 AAGACTGGCCTAGATGCATGAAACAGAAACCTGAGGAGCTCGCCGAGGCAGGCTTCTTCT 48471 Query 38500 ATTCGGGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGG 38559 || | || || ||| || ||||| || | |||| || ||| | || ||||||| Sbjct 48472 ATACCGGTCAAGGTGACAAGACTAAATGCTTTTACTGCGATGGAGGCTTGAAAGACTGGG 48531 Query 38560 AGCCTGCGGACGATCCGTGGGCGCAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGC 38619 || | |||| ||||||| |||||||||||| ||||||||| | ||||| ||||||| Sbjct 48532 AGAACGATGACGTGCCGTGGGAGCAGCACGCGCGTTGGTTCGACCGCTGCGCCTACGTGC 48591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537020041648840