Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4466 147 2e-30 seq75848 132 5e-26 seq4807 132 5e-26 seq1852 132 5e-26 seq5139 127 2e-24 seq5320 122 1e-22 >seq4466 Length=93423 Score = 147 bits (162), Expect = 2e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 |||||||| || || | |||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 6571 ATGTATGTGTCAATGAGCAGAGAGTACATCTCAGAGTGTACATTCTCCATAGCAATCTGG 6630 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || || ||||| ||||| ||||| || | |||||||| || || || | || || || Sbjct 6631 AAGCCATAGAAGCATCTTGCTTCAGTCACTTGCACTTCCTGTGAGAAGCGTTCCACCAGG 6690 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || || || || || ||||| || |||| || ||| || || || || Sbjct 6691 TTCTCATTGACAATGCCGTCCGAGGCAGCAAAGAAGGCCAGTACATGTTTAATGAAGTGC 6750 Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGATA 93575 ||||| || || || || ||||| || |||| Sbjct 6751 CTCTCACTGTCCTTGAGGTTCTCCCAGTCTGATA 6784 Score = 136 bits (150), Expect = 4e-27 Identities = 172/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 93110 AAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGT 93169 |||||| | || | || |||| |||||||||||| || || || || | || || || Sbjct 6046 AAACCT-CATCCCTAGAAATCAGCTCATTGCTGAAAGTCAATCCGGGCATCAAGCCACGC 6104 Query 93170 TTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCA 93229 ||||| | ||| || || || |||||||| ||||| ||||| || ||||| ||||| ||| Sbjct 6105 TTCTTCATCCAGAAGATAGAGGCAAAACTGCCAGAGAAAAAGATGCCTTCAACGGCAGCA 6164 Query 93230 AATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAA 93289 ||||| | || ||||| ||||| | || || || || |||||| | | ||||| Sbjct 6165 AATGCGATGATGCGTTCTGCAAATGTAGCTGACTTGCTTGCGATCCACTGCAGGGCCCAG 6224 Query 93290 TCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTC 93344 || || || ||||| | ||| || || ||||| ||||| || || ||| | |||| Sbjct 6225 TCAGCCTTCTTCTTTACACAGGGCAGGGTTTCAATAGCATTGAACAGGAAGTCTC 6279 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || ||||| ||||| || || ||||| ||||| ||||| || || || ||||| ||| Sbjct 7313 TTGGATAGATCCACTTCCTCTACGGTCCAGAACGAAGCTTCGGCCTTCTTATACATGTCC 7372 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || ||||| | || || || ||||||||||| || ||| ||||| || || | Sbjct 7373 CAGATGTCGGGGTACTGTATCGGAAATATGACGAAGCGACGCGGGTTGTCGCGCAGAAGG 7432 Query 93701 GGCTCTAGTTGTGGGTCAAA 93720 ||||| |||||||||||| Sbjct 7433 GGCTCCTTTTGTGGGTCAAA 7452 Score = 86.0 bits (94), Expect = 7e-12 Identities = 118/161 (73%), Gaps = 7/161 (4%) Strand=Plus/Plus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGT-CAAGTGGATTCTTATTCATAACACCACA 92801 ||||| || || || ||||| |||||||||| || ||| || ||| ||||| || Sbjct 4623 TAGAACTCGGCGTCAAGTGTGAATACATTGTCCATCTGG----TTGGCCATGACACCCCA 4678 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 || ||||| || | |||||| ||||||||||| || ||||| |||||||| || || Sbjct 4679 CTTCTGGTACTCACTAACTTTCTTTTCAAAGAAGTTGGTCTTGCCTTCCAATGAGATGAG 4738 Query 92862 ATTCA-CTAGT-GATTGGATTCTTGGCGTTATAATACTTTT 92900 ||||| ||| || ||| ||||| | ||| || | || || Sbjct 4739 ATTCATGAAGTCGAATGGGTTCTTTGTGTTGTAGTGCTGTT 4779 >seq75848 Length=2179 Score = 132 bits (146), Expect = 5e-26 Identities = 89/97 (92%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 126261 TTACA-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCG 126317 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1830 TTACAAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAG 1771 Query 126318 GGAGCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||||||||||||||||||||||| ||| || Sbjct 1770 GGAGCGTGGGTTCGAACCCCACACCTGACAGATTGTT 1734 >seq4807 Length=174250 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 35350 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 35291 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 35290 GTGGGTTCGAACCCCACACCTGACAAA 35264 >seq1852 Length=15351 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 1125 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 1066 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||||||| Sbjct 1065 TGGGTTCGAACCCCACACCTGACAAAT 1039 >seq5139 Length=346078 Score = 127 bits (140), Expect = 2e-24 Identities = 87/97 (90%), Gaps = 6/97 (6%) Strand=Plus/Minus Query 126259 ATTTACA----GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC 126314 ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 157739 ATTTACAATGTGTTAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCC 157680 Query 126315 --TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||||||||| Sbjct 157679 GAGAGGGAGCGTGGGTTCGAACCCCACACCTGACAAA 157643 >seq5320 Length=539926 Score = 122 bits (134), Expect = 1e-22 Identities = 84/93 (90%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 126259 ATTTACA-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC- 126316 ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| | | Sbjct 464218 ATTAACATGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGCA 464159 Query 126317 -GGGAGCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||| ||||||||||||||| ||||||||| Sbjct 464158 AGGGAGCATGGGTTCGAACCCCATACCTGACAA 464126 Score = 120 bits (132), Expect = 3e-22 Identities = 81/90 (90%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC--GGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||| | | |||||| Sbjct 449377 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGCAAGGGAGCA 449318 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTAT 126353 ||||||||||||||| ||||| ||||| || Sbjct 449317 TGGGTTCGAACCCCATACCTGGCAAATAAT 449288 Score = 116 bits (128), Expect = 4e-21 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC--GGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||| | | |||||| Sbjct 205445 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGCAAGGGAGC 205386 Query 126323 GTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||| ||||| ||| Sbjct 205385 ATGGGTTCGAACCCCATACCTGGCAA 205360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556256752207960