Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq4541 113 3e-20 seq4844 84.2 2e-11 >seq4541 Length=104953 Score = 113 bits (124), Expect = 3e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 108447 ACAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC 108506 |||||||||||| ||||||| | || || | || |||||||||||||| || || Sbjct 52961 ACAGAACACCATATACGAGTGGGTACGGGACCATCGCGTGCACCACAAGTACTCCGAAAC 53020 Query 108507 GACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566 | | || ||||| ||| |||||||| | ||||||| ||||||||||| || ||||| || Sbjct 53021 GTCAGCGGACCCCCACGACGCCAACCGAGGGTTCTTCTTCTCGCACGTCGGTTGGCTGAT 53080 Query 108567 GATGACCAAGGACCCCGACGTG 108588 ||||| || |||| |||||| Sbjct 53081 GATGAAGAAACACCCTGACGTG 53102 >seq4844 Length=183459 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 108769 TACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGAC 108828 ||||| ||| ||||||| | |||||||| ||||| || || || |||| || || || Sbjct 25466 TACGCATTCATCCTCAACGTCACGTGGCTCGTCAACTCCGCAGCACACAAGTGGGGAGAT 25407 Query 108829 CGTCCGTTCGACAAGAACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTC 108888 || | |||||||| ||| || || ||| || |||||| ||| |||||| Sbjct 25406 AAGCCCTACGACAAGAGCATCAAGCCCTCGGAGAACTTATCAGTGGCGATGTTCGCTCTC 25347 Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 || || || | || |||||||||||| ||||||| || ||||| | || ||| | Sbjct 25346 GGGGAAGGGTTCCATAACTACCACCACACCTTCCCCTGGGATTACAAAACTGCTGAGCTT 25287 Query 108949 GGGAAC 108954 || ||| Sbjct 25286 GGCAAC 25281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369029809176