Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq84480 158 8e-34 seq4140 134 9e-27 seq1544 132 3e-26 seq4167 104 2e-17 >seq84480 Length=6514 Score = 158 bits (174), Expect = 8e-34 Identities = 585/899 (65%), Gaps = 27/899 (3%) Strand=Plus/Minus Query 5655 CGTGCACTCCGGACCACCCACGACCGTACATGGCTACACCCACAATTAGCTTCTTCGATT 5714 ||| |||||| | ||| || || |||||||| || ||||| || | | |||||| | Sbjct 6308 CGTTCACTCCAGTCCAACCTCGTCCGTACATAGCAACACCGACGACAATCTTCTTGGGGC 6249 Query 5715 CGACGCTCTGATTTAACAGACGCTTGATTGAAAAATCTGTCGTGTATGTCTCGCCTG-GG 5773 ||| | ||| || || || | || || || ||||||||||| | || || Sbjct 6248 TGACTCCTTGAGCCAAGAGGAATTTAACACCGAAGTCAGTTGTGTATGTCTC-CTTGCGG 6190 Query 5774 TTCCACGATGGAGCGTACAGAGGTGTCTGGTGTCCCAGATC--CGTTAACGACCAGGCAC 5831 ||||| | || || | ||| | |||||| || || |||| |||||||||| Sbjct 6189 TTCCATGCAGGGGCATGTAGACCAGCCTGGTGGCCAAGCGTGTCGTTG--GACCAGGCAC 6132 Query 5832 CCTTGTAGTCGTACGTCATAACAAAGATGTGATCAAGATACCTTTGTGCGCTGGCGTAGT 5891 ||||| ||||||| |||| | |||||||||||| | ||| || ||| ||||| Sbjct 6131 CCTTGAAGTCGTAGCTCATCAAAAAGATGTGATCCATGTACTGCTGAGCGGCCTTGTAGT 6072 Query 5892 CGACAACGTCGATCTTGTCATGTCCCGCGCCGATAGCACTTGTCAATT-GTAACCGTTTA 5950 | ||||| | |||||||| || | || ||| || |||| || ||| ||| Sbjct 6071 CAACAACCTGAATCTTGTCCCAACCAGAGCTGATGGCTGAGGTCAGTTCGTATTTCTTT- 6013 Query 5951 CCCCGCTTCTCGCCCAACTCGTCAAGCATCACGCGAAGTTCCCGCAACAAAAGAGTGTAC 6010 || ||| | || ||||| | |||| | | | |||| || || || || Sbjct 6012 CCAGTCTTGGCTGACAGCTCGTTCAACATCTCTCTCAATTCCTTCATCAGC----TGCAC 5957 Query 6011 GTA---TTG-CGGTCCACCTCGGCATTACCCAACACAGGATTAGCACCCTTTCCACCCGG 6066 ||| ||| | ||| |||| | ||| | | || || || ||||| ||||| || Sbjct 5956 GTAGATTTGACCGTCT---TCGGGACCACCTAGGTCGGGGTTGGCTCCCTTACCACCAGG 5900 Query 6067 AAACTCCCAGTCAATGTCCACTCCGTCAAAGAACTTCCATGTCTCCAGAAACTCGCGGAC 6126 |||||||| |||||||| || || || ||||| ||||| ||||| || || || || Sbjct 5899 GAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAGGTCTCGAGGAAGTCCTTCAC 5840 Query 6127 ACTTGTGACGAA-CACCTTACGTTTGGAGTCATCGTTCATAAAATAAAACGGATCGCTCA 6185 | |||||| | ||| ||| | ||| | | || |||| |||||| || Sbjct 5839 TGAGGCGACGAAGCGGCTTCTCTTTTCCTTG-TCGGTGAAGAAGAAAAAGGGATCGGCCA 5781 Query 6186 ACGTCCACCCCCCTATGGATGGTAGGACTGTCAACGAAGGGTTGTGAC-GTTTGATGGCC 6244 ||||| || || | || || |||| ||| | ||| | | |||| | | Sbjct 5780 GGGTCCATCCACCAACAGAAGGAAGGATCTTCAG-GTCTGGTCTCGCCTGTTTCAACATC 5722 Query 6245 ATCAGCTGGCCAAAGTTACCCTTGTACGCTTCGTTGTACGCCTCAACGCCTTTCTGTGGT 6304 |||| |||||| ||||| |||||||| | ||||| | | | | || ||||||||| Sbjct 5721 ATCAACTGGCCGAAGTTGCCCTTGTAAGGCTCGTTCCATGAACCCAAACCCTTCTGTGGT 5662 Query 6305 TTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTGAAGTCATCGCGACCAGCGCAG 6364 || || | || ||||| || || || ||| |||||||| || | || ||| Sbjct 5661 TTCTGAAGAGCAGCCCAAGGATCATGGATGGACACTTTGAAGTCTTCCCTGCCGCTGCAT 5602 Query 6365 GATTTCTGTAGCGCCT--CAAAGGAATTGGGAATCTGCTTGAGGGCGTCGTTTATGCCGT 6422 ||| | || || || | || | || ||||| || | |||||| ||||| | Sbjct 5601 GATCTTTGCAGAGCTTGGAAACTGCCTT--CAATCTCTTTCAAACTGTCGTTGATGCCAT 5544 Query 6423 TACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAGGTATTGGTACCT 6482 ||||| |||||||| ||||| ||||| || || || || ||||| || || || || Sbjct 5543 CTCCACCGCAAATTGGGATGAAACCGTAAAGAAGATGAGTTAGATTGGGGATAGGCACAC 5484 Query 6483 TGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCACGAAATACGCACCGACGACC 6541 ||||| ||| |||| || || || ||||| || ||||| || ||||| |||||| Sbjct 5483 GGTCAACGGGGAACTTCCTCGGGTAGACACCCCATTCGACGAAGTATGCACCAACGACC 5425 >seq4140 Length=56097 Score = 134 bits (148), Expect = 9e-27 Identities = 170/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 || ||||| || | ||| | |||||||||| ||| ||| ||||| ||||| ||||| Sbjct 50449 TTACCTCCTCTAAGCCTAAGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCA 50390 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 ||||| | || |||| |||| |||||| || || || || ||||| ||||| ||| | Sbjct 50389 GAAAGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAGATAAGTCGCTGCTGATCTGGT 50330 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCT 34929 || | ||||||||||| ||||| |||||| || || || | || |||| Sbjct 50329 GGGATTCCCTCCTTGTCCTGGATCTTTGCTTTGAC--ATTCTCAATAGTGTCTGAAGCCT 50272 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || |||| ||| |||||||| |||||||| || || || ||||||||||| Sbjct 50271 CCACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTTACGAAGATCTGCAT 50220 >seq1544 Length=14195 Score = 132 bits (146), Expect = 3e-26 Identities = 160/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | ||| |||||| || ||||| ||||| |||||| | ||| |||| Sbjct 3046 CAAGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGTCCATC 3105 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| |||||| ||||| || || || || ||||||||| | || | || |||||||| Sbjct 3106 TTCCAACTGTTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTC 3165 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 |||||| ||||| || || || | ||| || |||||| || | ||| ||| Sbjct 3166 TTGAATCTTGGCCTTGAC--ATTCTCAATGGTATCAGAGGGCTCAACTTCCAGGGTGATG 3223 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || | || || ||||||||||||||| Sbjct 3224 GTTTTGCCAGTCAAGGTTTTGACAAAGATCTGCATA 3259 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| ||| ||| || || || || ||||| ||||| | || |||| Sbjct 4186 CAAGACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGAAAGCGTACGACCATC 4245 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| || ||||| || || || || |||||||| | || | || |||||||| Sbjct 4246 TTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTC 4305 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 |||||| ||||| || || || | ||| | ||||| |||| ||| ||| Sbjct 4306 TTGAATCTTGGCCTTGAC--ATTCTCAATAGTGTCAGAAGGTTCAACCTCGAGGGTGATG 4363 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | || || ||||||||||||||| Sbjct 4364 GTCTTACCAGTCAAGGTTTTGACAAAGATCTGCATA 4399 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| |||||| | || |||| |||| ||| || ||||| || Sbjct 3751 TTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGACCATCTTCCAACTGCTTGCCGGCGAA 3810 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || |||||| | || | || ||||| || |||||| ||||| | Sbjct 3811 GATAAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTGGCCTTGAC--A 3868 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | ||| | ||||| |||| ||| ||||| || || || | || || Sbjct 3869 TTCTCAATAGTGTCAGAAGGTTCAACCTCGAGGGTGATGGTCTTACCAGTCAAGGTTTTG 3928 Query 34968 ACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 3929 ACAAAGATCTGCATA 3943 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| |||||| | || |||| |||| ||| || ||||| || Sbjct 3523 TTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGACCATCTTCCAACTGCTTGCCGGCGAA 3582 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || |||||||| ||||| || || Sbjct 3583 GATAAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATT 3642 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | |||| || | ||||| |||| ||| ||||| || || || | || || || Sbjct 3643 TTCAATCGTGTCCGAAGGTTCAACCTCGAGGGTGATGGTCTTACCAGTCAAGGTTTTGAC 3702 Query 34970 AAAGATCTGCATA 34982 ||| ||||||||| Sbjct 3703 AAAAATCTGCATA 3715 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| || || ||||| ||||| || ||| | || | || || Sbjct 2822 ACCAAGTGAAGGGTCGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCA 2881 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || | || ||||||||| | || | || || ||||| Sbjct 2882 AGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGGATGCCTTCTTTGTCCTGG 2941 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | ||| | ||| || |||| ||| || || || Sbjct 2942 ATCTTAGCCTTTACATTTTCAATTGTATCAGAAGGCTCGACCTCGAGGGTAATAGTCTTG 3001 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| ||||||||||||||| Sbjct 3002 CCAGTCAAGGTCTTGACAAAGATCTGCATA 3031 >seq4167 Length=57674 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| ||| ||||| || || ||||| || || | ||| |||| ||| Sbjct 17801 ACCAGGTGAAGTGTAGATTCCTTCTGGATATTGTAGTCGGATAGAGTGCGTCCATCTTCC 17860 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || |||||||| || || | || |||||||| | || | || |||||||| | Sbjct 17861 AGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGA 17920 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || | | || | ||| || || || || | || || ||||| Sbjct 17921 ATCTTAGCTTTAACATTTTCGATGGTATCAGAGGGTTCCACCTCCAAAGTGATTGTTTTC 17980 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| | ||||||||| ||||||||||| || Sbjct 17981 CCCGTCAAAGTCTTCACGAAGATCTGCATGTT 18012 Score = 102 bits (112), Expect = 5e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | |||| ||||||||| |||||||| || || || | || |||| || Sbjct 16432 AACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCATCTTC 16491 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||| || || || || | || ||||||||| | || | ||||| ||||| Sbjct 16492 CAGCTGTTTGCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTGTCTTG 16551 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||| || ||| || | | || | ||| ||||| || || | || ||||| || Sbjct 16552 AATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATGGTCTT 16611 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || ||||| || |||||| Sbjct 16612 GCCAGTCAGGGTTTTGACAAAAATTTGCATA 16642 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| || || || || |||||||| || || || | || |||| ||| Sbjct 17117 ACTAAGTGAAGAGTAGACTCCTTTTGGATGTTATAATCAGAGAGCGTGCGACCATCTTCC 17176 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| ||||| || || | || ||||||||| | || | || |||||||| | Sbjct 17177 AGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCTGGAGGTATTCCTTCCTTGTCCTGA 17236 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || ||| ||| || | | || | ||| || || || || | || ||||| || Sbjct 17237 ATTTTCGCTTTAACATTTTCAATTGTGTCAGAGGGTTCGACCTCTAGTGTAATGGTCTTG 17296 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||| || ||||| |||||| Sbjct 17297 CCAGTCAAAGTCTTGACGAAGATTTGCATA 17326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324290261316312