Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4228 174 8e-39 >seq4228 Length=62806 Score = 174 bits (192), Expect = 8e-39 Identities = 272/389 (70%), Gaps = 0/389 (0%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 |||||| | | ||||||||||||||| ||||| | |||||||| | || || || | Sbjct 18864 TCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGTTCCCTAGCACGT 18805 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 | ||||||||| || ||||||||| | ||| | || ||||| || || | |||||| Sbjct 18804 ACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATGTCAGCATGCCAT 18745 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 ||||| ||||| || ||||| || |||||| || |||||||| ||||| | Sbjct 18744 GGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGATCGACGTAACGC 18685 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161 || || | ||| ||||| | ||||| || || | ||| | || | || ||||| | | Sbjct 18684 GCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCGACACACCATTTGTACCA 18625 Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCAT 26221 || | | ||| | ||||||||| |||| |||| | || || ||||| || || Sbjct 18624 GCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGAGGCCAATCCCACCTGCTGAT 18565 Query 26222 TTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTC 26281 || ||||| |||||| | | | ||||| ||||||||| || |||||| ||||| Sbjct 18564 TTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTTCAATACTATCATCTTTC 18505 Query 26282 ATTCCTAATAAAAAACAAGAAGATAATTG 26310 || ||| | || |||||||| | ||| Sbjct 18504 ATGGCTATAAGGAAGCAAGAAGACAGTTG 18476 Score = 102 bits (112), Expect = 4e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 || || || ||||| || | |||| ||| |||||| || || |||||||| ||||| Sbjct 19737 AACTCACCCGACAAGACACGTCTTTGGTATATGTTTGATGTAAAAGGTTCAAATGATTCA 19678 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 |||||||| || || || | || || || |||||||| ||||| ||||| |||||| Sbjct 19677 TTATTTCCCAATATCTGTGCTGTGGAAGCAGTTGGCATAGGTGCTAGCAATAGTGAATTT 19618 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 || | ||||| ||| |||||| | ||||| | |||||| || Sbjct 19617 CTAAGACCATGTTTTGCAATCTTCTCTTTTAGTGAATCCCAGTC 19574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252772380072425