Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4228 158 1e-33 >seq4228 Length=62806 Score = 158 bits (174), Expect = 1e-33 Identities = 475/720 (66%), Gaps = 19/720 (3%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||||| ||||| | || |||| || || ||||||||||| |||||||| || ||| Sbjct 19004 TGGAAAGCTATAATTGAAGCACAAGTTGAAACAGGAACACCATACATGCTTTATAAAGAT 19063 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 | || |||| || |||||||| |||||| | || || || || || || |||||| Sbjct 19064 TCATGCAACAGAAAAAGTAACCAGAAGAATCTAGGCACCATTAAATGCAGCAACCTTTGC 19123 Query 75998 ACGGAAATTTTAGAGTACACAGATAAG--GATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 || |||||| |||| || || | || ||||| ||||| |||||||| || |||| Sbjct 19124 ACTGAAATTGTAGAATATAC--TTCAGCAGATGAAGTTGCTGTCTGCAATTTAGCTTCAA 19181 Query 76056 TCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATG 76115 | || | | || ||| ||||| || | || | ||| | ||| | | | Sbjct 19182 TTGCATTAAATATGTTTGTAAATGATGA---TAAAACATACAATTTTATCAAATTGAAAG 19238 Query 76116 AAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCG 76175 || |||| || | | | || | ||||| ||| | | ||||| || ||||| || | Sbjct 19239 AAGTCACTAAAACTATAACTGAGAATCTGAACAAAATTATTGATGTGAACTTTTACCCAG 19298 Query 76176 T-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 | ||| || ||| || |||||| | |||||||| ||||| | || |||||||| Sbjct 19299 TGCCAGA-GGCAAAAAAATCAAATATGAGGCACAGACCCATTGGAATTGGAGTTCAAGGA 19357 Query 76235 CTCGCGGATGTATTTATTTT-GTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 | || |||| ||| |||| ||| ||| ||| ||| || | || | | | Sbjct 19358 TTAGCTGATGCTTTTGTTTTAATGCGCATAC-CATATGAAAGCGAAGCTGCTATAAAATT 19416 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 ||| | || |||||||| || || | | | |||||||| || |||||||| || Sbjct 19417 AAATCAACAAATATTTGAAACAATCTACTATGGTGCACTGGAGGCTAGCTGTGAATTAGC 19476 Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413 || || || |||||||| | ||| || || || |||||| | | || Sbjct 19477 CGAGAAGCATGGAGTATATGAGACTTATGAAGGCAGCCCTGCAAGCCAAGGTATATTGCA 19536 Query 76414 GTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTACGACTGGGATGTTCTCAAGGAA 76471 || ||| |||| |||| || ||| || | | ||||||||| || || || Sbjct 19537 GTATGACATGT-GGAACAAGACCCCAACAGAT-TTGTGGGACTGGGATTCACTAAAAGAG 19594 Query 76472 CGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCT 76529 || ||| | | |||||| | || || ||| | ||||| |||||||| || | Sbjct 19595 AAGATTGCAA--AACATGGTCTTAGAAATTCACTATTGCTAGCACCTATGCCAACTGCTT 19652 Query 76530 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACC 76589 |||| ||||| || ||||| |||||||||| |||||||| | ||| ||||||| |||| Sbjct 19653 CCACAGCACAGATATTGGGAAATAATGAATCATTTGAACCTTTTACATCAAACATATACC 19712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595922478583520