Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4466 113 5e-19 seq61929 111 2e-18 seq57765 105 8e-17 >seq4466 Length=93423 Score = 113 bits (124), Expect = 5e-19 Identities = 148/203 (73%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 869195 ATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATG 869254 |||| || ||||| || | | |||||||| | ||| |||||||| | ||| ||||| Sbjct 6063 ATCAGCTCATTGCTGAAAGTCAATCCGGGCATCAAGCCACGCTTCTTCATCCAGAAGATA 6122 Query 869255 GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCG 869314 | | |||||||| |||||||||||||| || ||||| ||||| |||||| || || Sbjct 6123 GAGGCAAAACTGCCAGAGAAAAAGATGCCTTCAACGGCAGCAAATGCGATGATGCGTTCT 6182 Query 869315 GCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTC 869374 ||||| ||| | | | | |||| |||||||| || |||||||| ||||| ||| | Sbjct 6183 GCAAA--TGTAGCTGACTTGCTTG-CGATCCACTGCAGGGCCCAGTCAGCCTTCTTCTTT 6239 Query 869375 ACCGACGGCACCGTGTCGATGGC 869397 || | |||| || || || || Sbjct 6240 ACACAGGGCAGGGTTTCAATAGC 6262 >seq61929 Length=1247 Score = 111 bits (122), Expect = 2e-18 Identities = 180/257 (70%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 1573779 CCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAG--CACG 1573836 || ||||| |||||||| || || | | || ||||| || ||||||||| |||| Sbjct 887 CCATGGATAGAAAAGTACCGGCCGGTAACGTTCAGTGACATCGTGGGCAACGAGGACACG 828 Query 1573837 CCGTCGCCTATCTCAGAGCGCTGGCTGCCGACGGCGACATGCCCAACCTCTTGCTGGCGG 1573896 ||||| | | | | | || || ||| || |||||| || | | |||| Sbjct 827 GTGTCGCGGCTGGCGGTGTTCGCGCGCACG--GGCAACGCTCCCAACATCATAATCGCGG 770 Query 1573897 GTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCG 1573956 | ||||||||| |||||||||||| | |||| ||| |||||||| | || |||||| Sbjct 769 GCCCGCCCGGCGTGGGCAAGACCACCACCATCCTGTGCCTGGCGCGCGCGCTGCTGGGCG 710 Query 1573957 CGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCG 1574016 | || | || |||||||| || ||||||||||| | || |||||| | || |||| Sbjct 709 CCGCATTTAAGGATGCCGTGCTGGAGCTCAACGCGTCCAATGACCGCGGCATTGATGTCG 650 Query 1574017 TGCGCAAGATCATCAAG 1574033 ||||||| | |||||| Sbjct 649 TGCGCAACAAGATCAAG 633 >seq57765 Length=1122 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 || |||| | |||| || |||| |||||||| || ||||||||||||| ||||| | | Sbjct 14 GCTTCGGCGGCGATACGCTCGAAGATGTCGTTCACGAACGAGTTCATGATTGACATGGCC 73 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 || ||||||| || |||||||||||||||||| || |||||||||||| Sbjct 74 TTACTGGAGATACCGGTGTCGGGGTGCACCTGCTTCAGAACCTTGTAGATG 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100017708873943