Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq26 174 1e-38 seq84480 167 2e-36 seq2172 150 1e-31 seq4134 131 1e-25 seq65036 100 2e-16 seq1544 95.1 1e-14 seq4167 89.7 4e-13 >seq26 Length=10051 Score = 174 bits (192), Expect = 1e-38 Identities = 125/144 (87%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 34506 CGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTC 34565 |||||| || | || ||||||||||||||||| |||||||||||||||||||| || || Sbjct 3937 CGCCTTAGCCACCTCTGGCATGTTGACGATGACGGTCTTGATGCCGTTGCCCTTGCCCTC 3878 Query 34566 GACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTT 34625 ||||||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||| Sbjct 3877 GACCTTGGCACAGATGCGAGGCATCTTGTACCGGTAGAAGGCGTCCGCGACATTGCGGTT 3818 Query 34626 AACGTTCACAGTCCCCATCGTGGC 34649 |||||||| | |||||| | ||| Sbjct 3817 CACGTTCACCGACCCCATGGCGGC 3794 Score = 149 bits (164), Expect = 5e-31 Identities = 133/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 34201 GCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA 34260 || |||||||| || || ||||||||||||||||| || ||||| ||| |||||| Sbjct 5430 GCGGGCGGGTTCTTGAGGATGAAGGTGTTGAGCTTGTGGTTGAAGTCCAGCACGCCGTGG 5371 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 || ||||| || ||||||||||| |||| |||| || | ||||||||| ||||| Sbjct 5370 TAGCCGCACGCCTTGCAGCCCTGCGAGATGGTGTTGCGCTTGGTGGACACGATCAGCTCC 5311 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 |||||||||||||| || || || |||| ||| |||||||||||||| Sbjct 5310 GTCTCCGGGTTGTCGCACTCGGGGCACAGCACGAACTTGCGGATGAA 5264 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || ||||||||||| | ||| ||||||||||| ||||||||||||||| || ||| Sbjct 4753 CCGTCCAGCAGGTCCTGCAGCTTGGCGGAGTCGTGGCTGCCGTTGACGATGAACCGCTCG 4694 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || ||| | |||| |||||| |||||||||| |||||| || |||||||| || || Sbjct 4693 TTCTTGAAGTCGAACTGCGTCTGCGCGCCCAACTCGCAACCAAAGTACTTCGTAGG 4638 >seq84480 Length=6514 Score = 167 bits (184), Expect = 2e-36 Identities = 629/973 (65%), Gaps = 23/973 (2%) Strand=Plus/Plus Query 28802 CGTCGCTGCGTATTTTGTGGAATGGAGCGTGTACGGCCGCAACTTTTCGGTGGACAAGGT 28861 ||| | ||| || || || |||||| | || ||| | || || | || ||| || Sbjct 5428 CGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCCGAGGAAGTTCCCCGTTGACCGTGT 5487 Query 28862 GCCGCTGCCCAACCTCTCGCATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGG 28921 ||| | ||||| || | ||||| | ||||| ||| | || |||||||| || || || Sbjct 5488 GCCTATCCCCAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGG 5547 Query 28922 GCTCAACGACGCCCTTAAAACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAA 28981 |||||||| | ||| || || ||||| |||| |||||| | || |||| Sbjct 5548 CATCAACGACAGTTTGAAAGAGATTGAAGGCAGTTTCCAAGCTCTGCAAAGATCATGCAG 5607 Query 28982 CGGCCGTTCAGATTTTAAAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCA 29041 |||| | ||| || ||||| | || || ||||||||||| || | || ||||| || Sbjct 5608 CGGCAGGGAAGACTTCAAAGTGTCCATCCATGATCCTTGGGCTGCTCTTCAGAAACCACA 5667 Query 29042 AAAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATG--GCT 29099 ||||| || | | ||||||||||| ||||| ||||| ||||| ||| | ||| | | Sbjct 5668 GAAGGGTTTGGGTTCATGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTT 5727 Query 29100 GCCAAGTTGGCCAATCCACACATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCC 29159 | || ||| | ||| || | || || || || || | || || ||||| || || Sbjct 5728 G--AAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCTGTTGGTGGATGGACCCTGGCC 5785 Query 29160 GA-CCCTTTTTATTTTATGCACGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGA 29218 || |||||||| || | | |||| ||| || | || || || | ||| || | Sbjct 5786 GATCCCTTTTTCTTCT-TCACCGACAAGGAAAAGAGAAGCCGCTTCGTCGCCTCAGTGAA 5844 Query 29219 GGAATTTTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGG 29278 ||| || | || |||||||| || || || || |||||||| ||||| || || || Sbjct 5845 GGACTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGG 5904 Query 29279 CGGTAAAGGCGCTAA-CCCGACACTTGGCAACGGGGAGCGCGACG-CCGACACGTATA-- 29334 ||||| || || || |||||| || || | | ||| | | | || | || Sbjct 5905 TGGTAAGGGAGCCAACCCCGAC-CT------AGGTGGTCCCGAAGACGGTCAAATCTACG 5957 Query 29335 -ACATTTTACTGAAGGAATTGCGCGCAATGCTGGATAAACTGCAATTGCAAACGGGTAAA 29393 || | | ||||||||||| | | ||| || | | ||| | | || || || Sbjct 5958 TGCAGCTGA-TGAAGGAATTGAGAGAGATGTTGAACGAGCTGTCAGCCAAGACTGGAAAG 6016 Query 29394 ACGTATGAATTGACAAGCGCAATCAGCTCTGGCCACGACAAAATTGCTGTAGTGAAATAC 29453 | || ||| |||| || ||||||||||| ||||| ||| || || | ||| Sbjct 6017 AAATACGAACTGACCTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTTGTTGACTAC 6076 Query 29454 GACGTTGTGCAAAAATTTCTTGATAAAATATTTCTAATGAGTTACGATTTTAAAGGCGCA 29513 | | | || | | | ||| | || ||| | ||||| ||||| || || || || Sbjct 6077 AAGGCCGCTCAGCAGTACATGGATCACATCTTTTTGATGAGCTACGACTTCAAGGGTGCC 6136 Query 29514 TGGTCAAAC-AC-CGATTTGGGATATCAAACTACACTCTACGCACCGAGTTGGAATCCCA 29571 ||||| ||| || || || || | || || || | || || ||||| | || Sbjct 6137 TGGTCCAACGACACGCTT--GGCCACCAGGCTGGTCTACATGCCCCTGCATGGAACCGCA 6194 Query 29572 ACGAGCTTTACAACACTGACCACGCCGTAAAGTCGCTCACTAACCAAGGCGTGGACCCGC 29631 | ||| |||| |||||| || || || | ||| ||||| || ||| Sbjct 6195 AGGAGACATACACAACTGACTTCGGTGTTAAATTCCTCTTGGCTCAAGGAGTCAGCCCCA 6254 Query 29632 GCAAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACGGGCGTGACCGGTTACG 29691 || ||| | || || || || |||||||| || |||||||| || |||| ||| ||| Sbjct 6255 AGAAGATTGTCGTCGGTGTTGCTATGTACGGACGAGGTTGGACTGGAGTGAACGGCTACA 6314 Query 29692 TCGGTGACAACTATTTTAAAGGCACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGACG 29751 | || |||| || | ||| |||| | || || || | || || ||| | |||| Sbjct 6315 AGGATGGCAACCCATTCACTGGCGTAGCTACTGGCCCAGTCAAGGGAACATGGCAGGACG 6374 Query 29752 GAGTTGTCGACTA 29764 |||| || ||||| Sbjct 6375 GAGTGGTGGACTA 6387 >seq2172 Length=16819 Score = 150 bits (166), Expect = 1e-31 Identities = 338/505 (67%), Gaps = 2/505 (0%) Strand=Plus/Plus Query 28802 CGTCGCTGCGTATTTTGTGGAATGGAGCGTGTACGGCCGCAACTTTTCGGTGGACAAGGT 28861 ||| | ||| || || || |||||| | || ||| | || ||| | || ||| || Sbjct 7270 CGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCTGAGGAAGTTTCCAGTTGACCGCGT 7329 Query 28862 GCCGCTGCCCAACCTCTCGCATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGG 28921 ||| | || || || | ||||| | ||||| ||| | || |||||||| || || || Sbjct 7330 GCCCATCCCTAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGG 7389 Query 28922 GCTCAACGACGCCCTTAAAACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAA 28981 |||||||| | | ||| || || ||||| || |||||| || |||| Sbjct 7390 TATCAACGACAGCTTGAAACAGATTGAAGGCAGTTTCCAAATTCTGCAAAAATCATGCAG 7449 Query 28982 CGGCCGTTCAGATTTTAAAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCA 29041 ||| | ||| || ||||| | || || ||||||||||| || | || ||||| || Sbjct 7450 GGGCAGGGAAGACTTCAAAGTGTCAATCCATGATCCTTGGGCTGCTCTTCAGAAACCACA 7509 Query 29042 AAAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGC 29101 |||||| || |||| ||||||||||| ||||| ||||| ||||| ||| | ||| Sbjct 7510 AAAGGGTTTGACTGCCTGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTT 7569 Query 29102 CAAGTTGGCCAATCCACACATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGA 29161 || ||| | ||| || | || || || || || | || || ||||| || |||| Sbjct 7570 AAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCAGTTGGTGGATGGACCCTGGCCGA 7629 Query 29162 CCCTTTTTATTTTATGCA-CGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGAGG 29220 ||||| | | || | || |||| ||| || | | || || | ||| || ||| Sbjct 7630 TCCTTTCT-TCTTCTTCACCGACAAGGAAAAGAGAAACCGCTTCGTCGCCTCAGTGAAGG 7688 Query 29221 AATTTTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCG 29280 | || | || |||||||| || || || || |||||||| ||||| || || || | Sbjct 7689 ACTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTG 7748 Query 29281 GTAAAGGCGCTAACCCGACACTTGG 29305 |||| || || || || | ||||| Sbjct 7749 GTAAGGGAGCCAATCCCAACCTTGG 7773 >seq4134 Length=55171 Score = 131 bits (144), Expect = 1e-25 Identities = 185/260 (71%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 103670 GAAGCTGCGCGTTTGCGCACTTTTACCGCGTGGCCGCGCGGTTTGAAGCAACATCCCGAG 103729 ||||| || || |||||| ||| | ||||| | | |||| || | || ||| Sbjct 48387 GAAGCCGCTCGGCTGCGCAGTTTCCAAGACTGGCCTAGATGCATGAAACAGAAACCTGAG 48446 Query 103730 ATACTTGCCGAAGCTGGTTTCTTTTACACCGGCAAAAGCGACAAAGTCAAATGCTTTTAC 103789 || ||||| || || ||||| || ||||| || | ||||| |||||||||||| Sbjct 48447 GAGCTCGCCGAGGCAGGCTTCTTCTATACCGGTCAAGGTGACAAGACTAAATGCTTTTAC 48506 Query 103790 TGCAACGGCGGTCTGAACAATTGGGAGCAAGATGACGACCCGTGGCAACAACACGCGCTT 103849 ||| | || || |||| | |||||| | ||||||| |||||| | || ||||||| | Sbjct 48507 TGCGATGGAGGCTTGAAAGACTGGGAGAACGATGACGTGCCGTGGGAGCAGCACGCGCGT 48566 Query 103850 TGGTTCGGACGCTGCGCATACGTGCTACTTGTCAAAGGCCACGATTATGTACAAAAGGTC 103909 ||||||| |||||||| ||||||| || || || || | ||| || || || ||||| Sbjct 48567 TGGTTCGACCGCTGCGCCTACGTGCAGCTGGTGAAGGGTCGCGAGTACGTCCAGAAGGTG 48626 Query 103910 GTGACCGAATCGTGCGTAGT 103929 |||| || ||||||| || Sbjct 48627 ATGACGGAGGCGTGCGTGGT 48646 >seq65036 Length=1358 Score = 100 bits (110), Expect = 2e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 33427 TCCTCGGCCTGCTGCAGCCAGTCCAGGAAGGGCTGCGCGCGGCGCCGCACGTCCGCCATC 33486 ||||| || ||||||||||| |||||||||||| |||||| | |||| ||| || ||| Sbjct 844 TCCTCAGCATGCTGCAGCCACTCCAGGAAGGGCGTGGCGCGGTGGCGCATGTCGGCGATC 785 Query 33487 TCCTCGCGGCTTAGCG-CTTTGCGGGACGGCTTGTAAAACCACTCCACGATCGCTTTCTT 33545 |||| || | ||| ||||| ||||||||| |||||||| ||||| || | Sbjct 784 ACCTCCTTGC-TGGCGTACTTGCGCGACGGCTTGGCCGCCCACTCCAGAATCGCCTTTTC 726 Query 33546 TTCCACCACGTTCAAGTCGTACAGCAGCT 33574 |||||| | || | |||||||||||||| Sbjct 725 TTCCACTATGTCCTCGTCGTACAGCAGCT 697 >seq1544 Length=14195 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||||||||| || || ||||||||||| ||| | ||| ||||| Sbjct 3258 ATGCAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCT 3199 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| ||||| |||||| | ||| || || Sbjct 3198 GATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 3139 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||||| || || |||||| |||| |||| | || | | || |||||| Sbjct 3138 CAGCGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACCCTTTCTGACTACAAC 3079 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 || ||||||||||| || | ||| |||| || Sbjct 3078 ATCCAAAAAGAATCCACTCTCCACTTGGTCTT 3047 >seq4167 Length=57674 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||||||||| | || ||||| |||||||| | ||| ||| || Sbjct 16641 ATGCAAATTTTTGTCAAAACCCTGACTGGCAAGACCATTACTTTGGAAGTCGAGGCTTCT 16582 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || ||| || ||| |||||||| || | ||| || || Sbjct 16581 GACACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAG 16522 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | || | || || ||||||||||| |||| | ||| | | ||||| ||| Sbjct 16521 CAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTCTCAGATTATAAC 16462 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || |||||||| || | ||| |||| || | ||||| || || Sbjct 16461 ATCCAGAAAGAATCCACACTCCACTTGGTTCTACGTCTGCGTGGTGG 16415 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||||||||| || || || ||||| || || | ||| ||||| Sbjct 17554 AATGCAAATCTTTGTCAAAACATTGACTGGTAAAACAATAACTTTAGAAGTTGAGCCATC 17495 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || ||| || || ||||| |||||| | || || || Sbjct 17494 AGACACAATCGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCAGACCA 17435 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| |||| || | || ||||| |||||||| |||| | | || | | |||||||| Sbjct 17434 GCAACGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACGCTTTCCGATTACAA 17375 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || |||||||| | || | ||| || | ||||| || || Sbjct 17374 TATTCAGAAGGAATCTACTCTTCATTTAGTGCTACGTCTGCGTGGTGG 17327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412404970854047