Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq61929 141 1e-27 seq57765 102 1e-15 seq45983 102 1e-15 seq4466 93.3 7e-13 seq5301 86.0 1e-10 seq4924 86.0 1e-10 seq4832 86.0 1e-10 seq3407 86.0 1e-10 >seq61929 Length=1247 Score = 141 bits (156), Expect = 1e-27 Identities = 189/258 (73%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975 || ||||| ||||||||||| ||| | | || |||||||||||||||||| || | Sbjct 887 CCATGGATAGAAAAGTACCGGCCGGTAACGTTCAGTGACATCGTGGGCAACGAGGACACG 828 Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGC-CG-ACGG-CAACATGCCCAACCTCTTGCTGGCG 2019032 || | || |||| || ||| || |||| |||| |||||| || | | ||| Sbjct 827 GTGTCGCGGCT---GGCGGTGTTCGCGCGCACGGGCAACGCTCCCAACATCATAATCGCG 771 Query 2019033 GGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGC 2019092 |||||||||||| |||||||||||| | |||| |||||||||||||| ||| ||||| Sbjct 770 GGCCCGCCCGGCGTGGGCAAGACCACCACCATCCTGTGCCTGGCGCGCGCGCTGCTGGGC 711 Query 2019093 GCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152 || || | || |||||||| || ||||| ||||| | || |||||| | || ||| Sbjct 710 GCCGCATTTAAGGATGCCGTGCTGGAGCTCAACGCGTCCAATGACCGCGGCATTGATGTC 651 Query 2019153 GTGCGTAGAATCATCAAG 2019170 ||||| | | |||||| Sbjct 650 GTGCGCAACAAGATCAAG 633 >seq57765 Length=1122 Score = 102 bits (112), Expect = 1e-15 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || |||||| || |||| | |||| || |||| |||||||| || |||||||||||| Sbjct 2 GCGAGGCGGGAAGCTTCGGCGGCGATACGCTCGAAGATGTCGTTCACGAACGAGTTCATG 61 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||||| | || ||||||| || |||||||||||||||||| || |||||||| Sbjct 62 ATTGACATGGCCTTACTGGAGATACCGGTGTCGGGGTGCACCTGCTTCAGAACCTTGTA 120 >seq45983 Length=880 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 ||||| | || || |||||| || | ||| | || ||||| ||| || | ||| || Sbjct 488 CTGCCAGCGGGGCGGCACAAGATGGTGATCTTGGACGAGGCGGACAGCATGACGGAGGGC 547 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || |||||||| || || |||||||| |||| | | || ||||| || |||||| Sbjct 548 GCGCAGCAGGCGCTGCGCCGCACCATGGAGCTGTACTCGCATACCACGCGCTTCGCGCTG 607 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 ||| ||| | || || | ||||||| || ||||| || |||||| | ||||| Sbjct 608 GCCGCCAATAATTCCGAGAAGATCATCGAGCCCATCCAGTCGCGCTGCGCCGTGCTGCGC 667 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGAT 2019400 | |||||||||||||||| ||||| Sbjct 668 TACTCGCGCCTCACCGACGCGCAGAT 693 >seq4466 Length=93423 Score = 93.3 bits (102), Expect = 7e-13 Identities = 132/182 (73%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAA 794436 |||||||| | ||| |||||||| | ||| ||||| |||| |||||||| |||||| Sbjct 6087 CCGGGCATCAAGCCACGCTTCTTCATCCAGAAGATAGAGGCA---AAACTGCCAGAGAAA 6143 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 |||||||| || ||||| ||||| ||| || || || ||||| ||| | | | Sbjct 6144 AAGATGCCTTCAACGGCAGCAAATGCGATGATGCGTTCTGCAAA--TGTAGCTGACTTGC 6201 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 ||| |||||||| || ||||| || ||||| ||| | || |||||| || || || Sbjct 6202 TTG-CGATCCACTGCAGGGCCCAGTCAGCCTTCTTCTTTACACAGGGCAGGGTTTCAATA 6260 Query 794557 GC 794558 || Sbjct 6261 GC 6262 >seq5301 Length=523423 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 331300 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 331241 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 331240 CTCACCCGGGGCATATC 331224 >seq4924 Length=211129 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 16593 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 16534 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 16533 CTCACCCGGGGCATATC 16517 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 18967 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 18908 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 18907 CTCACCCGGGGCATATC 18891 >seq4832 Length=179431 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 128693 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 128634 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 128633 CTCACCCGGGGCATATC 128617 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||||||| ||||| | || ||||| | ||||||||||||||||| Sbjct 162089 GCCTCGGTGGCGCAGTTGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 162030 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || | ||| Sbjct 162029 CTCACCCGGGGCAGATC 162013 >seq3407 Length=27796 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 2472 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 2531 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 2532 CTCACCCGGGGCATATC 2548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7907015321970981