Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq4134 232 5e-56 seq84480 219 3e-52 seq2172 190 2e-43 seq4167 87.8 1e-12 seq4140 87.8 1e-12 seq1544 86.0 5e-12 >seq4134 Length=55171 Score = 232 bits (256), Expect = 5e-56 Identities = 361/503 (72%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 103580 TACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAGATTATGCGCTGG 103639 ||| | ||||| || |||||||| |||||||| || || || ||||| |||||| ||| Sbjct 48138 TACCTCGGCCGTGGAGACGAAGTACGCTGCGCATTCTGTAAGGTGGAAATTATGAAATGG 48197 Query 103640 GAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAGTGTCCGTTCCTG 103699 | || |||||||| || || || |||||| | ||||||||||| || || ||| | Sbjct 48198 GTAGAAGGCGACGATCCTGCCAAGGACCATCAGCGATGGGCGCCGCAATGCCCATTCGTC 48257 Query 103700 aaaaaaaCGGCTGCTGGCGCGCTGCCCGC-CGGCCTTGCGATGGACGGGCAG-GACGAGT 103757 ||| || || |||| || ||| || ||| | | | | | || | ||||||| Sbjct 48258 CGAAAGTTGG--GC-GGCG-GC-GCCAGCTCGGACACGGGCAGCTCCGGACGCGACGAGT 48312 Query 103758 GCGGCGTGAGCGCGCTGCCGTC--CACCA--ACGCCTGCGTGCGCATGCCCGGCCCCGCG 103813 ||||| | | ||||| |||| | || || |||||| || |||||| ||||||||| | Sbjct 48313 GCGGC-TCA-CGCGCGGCCGCCAGCAGCACCACGCCTCCG--CGCATGTCCGGCCCCGTG 48368 Query 103814 CACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAACTTTTAAGGATTGGCCCCGGAGT 103873 ||||| || | || ||||| ||| | || | | | ||| | || ||||| | | Sbjct 48369 CACCCCCGCTACGTGTCCGAAGCCGCTCGGCTGCGCAGTTTCCAAGACTGGCCTAGATGC 48428 Query 103874 CTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACTACACCGGCCACAGCGAC 103933 ||||||||||||| ||| || | ||||| || || |||| ||| ||||| || | ||| Sbjct 48429 ATGAAACAGAAACCTGAGGAGCTCGCCGAGGCAGGCTTCTTCTATACCGGTCAAGGTGAC 48488 Query 103934 AACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGGAGCACGATGATGAGCCG 103993 || || |||||||| |||||||| || || | || || |||||| ||||||| | |||| Sbjct 48489 AAGACTAAATGCTTTTACTGCGATGGAGGCTTGAAAGACTGGGAGAACGATGACGTGCCG 48548 Query 103994 TGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATACGTGCTACTTGTCAAGGGCCAC 104053 ||| | || ||||||| || || ||| ||||| ||||||| || || ||||| | | Sbjct 48549 TGGGAGCAGCACGCGCGTTGGTTCGACCGCTGCGCCTACGTGCAGCTGGTGAAGGGTCGC 48608 Query 104054 GATTATGTACAAAAGGTCGTGAC 104076 || || || || ||||| |||| Sbjct 48609 GAGTACGTCCAGAAGGTGATGAC 48631 >seq84480 Length=6514 Score = 219 bits (242), Expect = 3e-52 Identities = 685/1050 (65%), Gaps = 23/1050 (2%) Strand=Plus/Plus Query 29066 CGTCGCTGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGT 29125 ||| | ||| || || || |||||||| || || | || || || || ||| || Sbjct 5428 CGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCCGAGGAAGTTCCCCGTTGACCGTGT 5487 Query 29126 GCCGCTGCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGG 29185 ||| | ||||| || | ||||| | ||||||||||| || |||||||| || || || Sbjct 5488 GCCTATCCCCAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGG 5547 Query 29186 GCTCAACGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAA 29245 |||||||| | ||| ||| |||||||| | || |||||| | || |||| Sbjct 5548 CATCAACGACAGTTTGAAAGAGATTGAAGGCAGTTTCCAAGCTCTGCAAAGATCATGCAG 5607 Query 29246 GGGCCGTTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCA 29305 ||| | ||| |||||||| | || || ||||| ||||| || | || ||||| || Sbjct 5608 CGGCAGGGAAGACTTCAAAGTGTCCATCCATGATCCTTGGGCTGCTCTTCAGAAACCACA 5667 Query 29306 AAAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGC 29365 ||||| || | | ||||||||||| ||||| || |||||||| ||| | ||| | Sbjct 5668 GAAGGGTTTGGGTTCATGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTT 5727 Query 29366 CAAGCTGGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGA 29425 || | ||| | || |||| || || || || || | || || ||||| || |||| Sbjct 5728 GAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCTGTTGGTGGATGGACCCTGGCCGA 5787 Query 29426 CCCGTTCTATTTCATGCACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAGA 29485 || || | ||| | |||| |||||| | | || || | ||| || | || Sbjct 5788 TCCCTTTTTCTTCTTCACCGACAAGGAAAAGAGAAGCCGCTTCGTCGCCTCAGTGAAGGA 5847 Query 29486 ATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGG 29545 || || || ||||| || || || || || ||||| || |||||||| || ||||| Sbjct 5848 CTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGG 5907 Query 29546 CAAAGGCGCCAA-CCCGACACTTGGCAACGGGGAGCGCGACG-CCGACACGTATA---AC 29600 || || ||||| |||||| || || | | ||| | | | || | || | Sbjct 5908 TAAGGGAGCCAACCCCGAC-CT------AGGTGGTCCCGAAGACGGTCAAATCTACGTGC 5960 Query 29601 ATTTTACTAAAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGGCAAAACG 29660 | | | | ||||||||| | | ||| || ||||| | | | || || || | Sbjct 5961 AGCTGA-TGAAGGAATTGAGAGAGATGTTGAACGAGCTGTCAGCCAAGACTGGAAAGAAA 6019 Query 29661 TACGAGTTGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGAC 29720 ||||| |||| || ||||| || || ||||||||| || ||| | ||| | Sbjct 6020 TACGAACTGACCTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTTGTTGACTACAAG 6079 Query 29721 GCTGCGCAAAAGTTTCTCGATAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGG 29780 || || || ||| | ||| | || || | ||||||||||| || || || || ||| Sbjct 6080 GCCGCTCAGCAGTACATGGATCACATCTTTTTGATGAGCTACGACTTCAAGGGTGCCTGG 6139 Query 29781 TCAAAC-AC-CGATTTGGGCTACCAAACTACTCTCTACGCGCCGAGTTGGAACCCAAACG 29838 || ||| || || || ||| |||| || ||| | || || ||||||| || | Sbjct 6140 TCCAACGACACGCTT--GGCCACCAGGCTGGTCTACATGCCCCTGCATGGAACCGCAAGG 6197 Query 29839 AACTGTACAACACGGACCACGCCGTTAAGTTGCTCACGAACCAGGGCGTGGACCCGCGCA 29898 | |||| || ||| || ||||| || ||| | || || || ||| | Sbjct 6198 AGACATACACAACTGACTTCGGTGTTAAATTCCTCTTGGCTCAAGGAGTCAGCCCCAAGA 6257 Query 29899 AAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAGGCGTGTCGGGTTATGACG 29958 | ||| | || || || || |||||||| || |||||||| || ||| || || | | Sbjct 6258 AGATTGTCGTCGGTGTTGCTATGTACGGACGAGGTTGGACTGGAGTGAACGGCTACAAGG 6317 Query 29959 GTGACAACTATTTTACGGGCACAGCTGCTGGGCCCGTGACCGGCACTTGGGAAGACGGCG 30018 || |||| || || ||| |||| |||| || || | || || ||| | ||||| | Sbjct 6318 ATGGCAACCCATTCACTGGCGTAGCTACTGGCCCAGTCAAGGGAACATGGCAGGACGGAG 6377 Query 30019 TTGTCGACTATCGCCAAATTGAAAACGAAA-TGAACAAGTACATT-----TACAAATTTG 30072 | || ||||| | | |||| | ||||| || |||| | | | ||| | | || Sbjct 6378 TGGTGGACTACAGAGAGATTGCCACCGAAATTGCTCAAGGAAAGTGGGAGTACCATTATG 6437 Query 30073 ACACGGCCGCTAAAGCAGCTTACGTTTTCA 30102 ||| || ||| ||||| ||||||| |||| Sbjct 6438 ACAAGGTAGCTCAAGCACCTTACGTGTTCA 6467 >seq2172 Length=16819 Score = 190 bits (210), Expect = 2e-43 Identities = 673/1047 (64%), Gaps = 17/1047 (2%) Strand=Plus/Plus Query 29066 CGTCGCTGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGT 29125 ||| | ||| || || || |||||||| || || | || ||||| || ||| || Sbjct 7270 CGTTGGTGCATACTTCGTCGAATGGGGTGTCTACCTGAGGAAGTTTCCAGTTGACCGCGT 7329 Query 29126 GCCGCTGCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGG 29185 ||| | || || || | ||||| | ||||||||||| || |||||||| || || || Sbjct 7330 GCCCATCCCTAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGG 7389 Query 29186 GCTCAACGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAA 29245 |||||||| | | ||| ||| |||||||| | |||||| || |||| Sbjct 7390 TATCAACGACAGCTTGAAACAGATTGAAGGCAGTTTCCAAATTCTGCAAAAATCATGCAG 7449 Query 29246 GGGCCGTTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCA 29305 |||| | ||| |||||||| | || || ||||| ||||| || | || ||||| || Sbjct 7450 GGGCAGGGAAGACTTCAAAGTGTCAATCCATGATCCTTGGGCTGCTCTTCAGAAACCACA 7509 Query 29306 AAAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGC 29365 |||||| || |||| ||||||||||| ||||| || |||||||| ||| | ||| | Sbjct 7510 AAAGGGTTTGACTGCCTGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTT 7569 Query 29366 CAAGCTGGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGA 29425 || | ||| | || |||| || || || || || | || || ||||| || |||| Sbjct 7570 AAAACAGGCGAGACCAGACCTGAAGATCCTTCCTTCAGTTGGTGGATGGACCCTGGCCGA 7629 Query 29426 CCCGTTCTATTTCATGCACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAGA 29485 || |||| ||| | |||| |||||| | || || | ||| || | || Sbjct 7630 TCCTTTCTTCTTCTTCACCGACAAGGAAAAGAGAAACCGCTTCGTCGCCTCAGTGAAGGA 7689 Query 29486 ATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGG 29545 || || || ||||| || || || || || ||||| || |||||||| || ||||| Sbjct 7690 CTTCCTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGG 7749 Query 29546 CAAAGGCGCCAACCCGACACTTGGCAACGGGGAGCGCGACG-CCGACACGTATA---ACA 29601 || || ||||| || | ||| || | | ||| | | | ||| | || || Sbjct 7750 TAAGGGAGCCAATCCCAACCTT------GGTGGTCCCGAAGACGGTCACATCTACGTCCA 7803 Query 29602 TTTTACTAAAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGGCAAAACGT 29661 | | | ||||||||| | | |||| || ||||| | | | || || || | | Sbjct 7804 GCTGA-TGAAGGAATTGAGAGAAATGTTGAACGAGCTGTCAGCCAAGACTGGAAAGAAAT 7862 Query 29662 ACGAGTTGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGACG 29721 |||| |||| || ||||| | || ||||||||| || || | ||| | | Sbjct 7863 ACGAACTGACCTCAGCCATCAGCGCTGGTTGGGACAAGATTCAGGTCGTAGACTACAAGG 7922 Query 29722 CTGCGCAAAAGTTTCTCGATAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGGT 29781 | || || ||| | || | || ||| | ||||||||||| || || || | |||| Sbjct 7923 CCGCTCAGCAGTACATGGACCATATCTTCTTGATGAGCTACGACTTCAAGGGTTCCTGGT 7982 Query 29782 CAAACACCGATTTGGGCTACCAAACTACTCTCTACGCGCCGAGTTGGAACCCAAACGAAC 29841 | |||| | | | ||| |||| || ||| |||| || | ||||||| | ||| Sbjct 7983 CCAACAATGCTCTTGGCCACCATTCTGGTCTACACGCCCCTACATGGAACCGCAGCGAGA 8042 Query 29842 TGTACAACACGGACCACGCCGTTAAGTTGCTCACGAACCAGGGCGTGGACCCGCGCAAAA 29901 |||| || ||| || || || | ||| | || || || | | || | Sbjct 8043 CATACACAACTGACTTCGGTGTCAAATCTCTCTTGGCTCAAGGAGTCAGCTCCAAGAAGA 8102 Query 29902 TTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAGGCGTGTCGGGTTATGACGGTG 29961 | | || || || |||||||| || | || ||||| || || || || | | || Sbjct 8103 TCGTCGTTGGTGTTGCCATGTATGGAAGAGGCTGGACTGGAGTAAATGGCTACAAGGATG 8162 Query 29962 ACAACTATTTTACGGGCACAGCTGCTGGGCCCGTGACCGGCACTTGGGAAGACGGCGTTG 30021 |||| || || ||| |||| |||| || || | || || ||| | || || || | Sbjct 8163 GCAACCCATTCACTGGCGTAGCTACTGGCCCAGTTAAGGGAACGTGGCAGGAGGGAGTGG 8222 Query 30022 TCGACTATCGCCAAATTG-AAAACGAAATGAACAAGTACATT-----TACAAATTTGACA 30075 | ||||| | | |||| ||| || |||| | | | ||| | | ||||| Sbjct 8223 TGGACTACAGAGAGATTGCCTCTGGAATTGCTCAAGGAAAGTGGGAGTACCATTATGACA 8282 Query 30076 CGGCCGCTAAAGCAGCTTACGTTTTCA 30102 || |||| | ||| ||||||| |||| Sbjct 8283 AGGTCGCTTACGCACCTTACGTGTTCA 8309 >seq4167 Length=57674 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| ||| | || || || |||||||| | ||| || ||| Sbjct 14589 ATGCAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTTGAAGCTTCT 14530 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || ||| || ||| || ||||| || | || || ||| Sbjct 14529 GACACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCTCCAGACCAG 14470 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | || | || || |||||| |||| |||| ||| || | |||||||| Sbjct 14469 CAGAGATTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACATTGTCAGACTACAAT 14410 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||||||||| ||||||||||| Sbjct 14409 ATTCAAAAGGAATCTACGTTGCA 14387 >seq4140 Length=56097 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || || || ||||| | || || |||||||| ||| |||| ||||||| Sbjct 50219 AATGCAGATCTTCGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTGGAGGCTTC 50278 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | || ||| |||||| || || || || | || ||||| Sbjct 50279 AGACACTATTGAGAATGTCAAAGCAAAGATCCAGGACAAGGAGGGAATCCCACCAGATCA 50338 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| ||||||| | || ||||||||| ||||||| | | || | | |||||||| Sbjct 50339 GCAGCGACTTATCTTCGCTGGTAAACAGTTGGAGGATGGCCGCACTCTTTCTGACTACAA 50398 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||| || ||||| || || | ||| ||||| Sbjct 50399 CATCCAGAAGGAATCCACCCTTCACTTGGTG 50429 >seq1544 Length=14195 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| ||||| || ||||| || || || ||||| || || | ||| ||| | Sbjct 5311 AATGCAGATTTTCGTGAAAACCTTGACGGGTAAAACTATCACTCTTGAAGTTGAGCCCTC 5252 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | |||||| || ||| || ||||||||| | || ||||| Sbjct 5251 AGACACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 5192 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| |||| || | || || || ||||| || |||| | ||| || | |||||||| Sbjct 5191 GCAGCGACTGATCTTCGCTGGAAAGCAGCTAGAAGACGGCCGCACACTGTCTGACTACAA 5132 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| || ||||| ||||| | ||| |||| Sbjct 5131 CATCCAGAAGGAATCTACACTCCACTTGGT 5102 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/217 (69%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||||||||| || || ||||||||||| ||| | ||| ||| | Sbjct 3258 ATGCAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCT 3199 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || |||||| || || |||||| | ||| || ||| Sbjct 3198 GATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 3139 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 ||| | ||||||| || || |||||| |||| |||||| || | | ||||| Sbjct 3138 CAGCGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGC----ACCCTTTCTGACTA 3083 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||| ||||| || || || | ||| |||| ||| Sbjct 3082 CAACATCCAAAAAGAATCCACTCTCCACTTGGTCTTG 3046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398454940292731