Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq4167 111 2e-19 seq1544 98.7 2e-15 >seq4167 Length=57674 Score = 111 bits (122), Expect = 2e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | |||||||| || || |||||||| ||| | || || || | || | Sbjct 17552 TGCAAATCTTTGTCAAAACATTGACTGGTAAAACAATAACTTTAGAAGTTGAGCCATCA- 17494 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||||| ||| |||||| ||| || |||||||||||||| || || Sbjct 17493 GACACAATCGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCAGACCAG 17434 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| |||| || || || ||||| || | || ||| | ||| | | ||||| ||| Sbjct 17433 CAACGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACGCTTTCCGATTACAAT 17374 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 || || || ||||| ||| | |||||||| |||| Sbjct 17373 ATTCAGAAGGAATCTACTCTTCATTTAGTGCTACG 17339 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | || || | || || || || || || | || || ||| | Sbjct 17096 TGCAAATATTCGTCAAGACTCTGACTGGCAAGACCATAACACTAGAAGTTGAAGCCTCTG 17037 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| || || ||||| ||||| || || |||| Sbjct 17036 ATACAATTGAAAATGTCAAAGCAAAAATCCAGGACAAGGAAGGAATTCCTCCTGACCAAC 16977 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||| ||||| || || ||||| || || ||| | |||||| | || || |||| Sbjct 16976 AGCGACTTATTTTCGCCGGCAAACAGTTGGAAGATGGGCGTACGTTATCCGACTACAATA 16917 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || |||||||| || | || |||||||| || Sbjct 16916 TCCAGAAAGAATCAACGCTTCACTTAGTATTGCG 16883 Score = 89.7 bits (98), Expect = 8e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||||| ||||| ||||| || || | || || || | | || Sbjct 17780 TGCAGATTTTCGTTAAAACATTGACAGGCAAAACCATCACATTGGAGGTTGAGCCTTCCG 17721 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || ||| ||| || || || || || || || | Sbjct 17720 ACACAATTGAAAATGTCAAGGCCAAGATCCAAGATAAGGAGGGAATCCCCCCAGACCAGC 17661 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || || || || ||||| | || ||| | || ||| | || || |||| Sbjct 17660 AGCGATTGATCTTCGCCGGCAAACAGCTTGAAGATGGGCGCACATTATCCGACTACAATA 17601 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || ||||| || |||| ||||||||||| Sbjct 17600 TCCAGAAGGAATCTACGCTCCACTTAGTATTACG 17567 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || |||||||| ||| | || || |||| | Sbjct 18008 TGCAGATCTTCGTGAAGACTTTGACGGGGAAAACAATCACTTTGGAGGTGGAACCCTCTG 17949 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| ||| ||| || ||| || ||||||||||| ||||| || | Sbjct 17948 ATACCATCGAAAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAGC 17889 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || || || || || ||| | || ||| | || || | || || |||| Sbjct 17888 AGAGATTGATCTTCGCCGGAAAGCAACTGGAAGATGGACGCACTCTATCCGACTACAATA 17829 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 17828 TCCAGAAGGAATCTAC 17813 >seq1544 Length=14195 Score = 98.7 bits (108), Expect = 2e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || || ||||| || ||| |||| || || | | Sbjct 5309 TGCAGATTTTCGTGAAAACCTTGACGGGTAAAACTATCACTCTTGAAGTTGAGCCCTCAG 5250 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| |||||| ||| ||||||||||||||||| ||||| | Sbjct 5249 ACACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAGC 5190 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 | |||| || || || || || || |||| || Sbjct 5189 AGCGACTGATCTTCGCTGGAAAGCAGCTAGAAGA 5156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785313615824680