Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4228 257 4e-63 >seq4228 Length=62806 Score = 257 bits (284), Expect = 4e-63 Identities = 446/640 (70%), Gaps = 19/640 (3%) Strand=Plus/Plus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||| || |||||||||| ||| ||| || || |||||| ||||||||| ||||||||| Sbjct 18476 CAACTGTCTTCTTGCTTCCTTATAGCCATGAAAGATGATAGTATTGAAGGAATTTATGAT 18535 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 |||| ||| || ||| || ||||||||| | || || ||||| | || ||||| Sbjct 18536 ACTCTAAAACAATGTGCACTAATTTCTAAATCAGCAGGTGGGATTGGCCTCCATGTTCAC 18595 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 |||| | || ||||| | |||| || | || |||| || | ||| ||||| Sbjct 18596 TGTATTAGATCCAAAGGTACTTATATAGCTGGTACAAATGGTGTGTCGAATGGTCTTGTG 18655 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGA 110747 || ||||||||||| | |||| |||| || || || ||||||| || ||| ||| Sbjct 18656 CCGATGTTAAGAGTTTACAACAACACAGCGCGTTACGTCGATCAAGGAGGTAATAAAAGA 18715 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 |||| ||||||| || ||| | ||||| |||||| | || ||||||||||| | || Sbjct 18716 CCTGGCGCATTTGCCATATATTTGGAACCATGGCATGCTGACATATTTGAATTTCTGGA- 18774 Query 110808 CTTCGTAAA--AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 || | ||| ||| || |||||| | | || | || | |||||||| | | Sbjct 18775 -TTTGAAAAAGAATACTGGGAAAGAAGAAGTACGTGCTAGGGAACTGTTTTATGCCTTAT 18833 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATG--TGGTCTCTTATGTG 110923 |||| |||||||||| |||||| | ||| || ||| || | ||| | | ||||| Sbjct 18834 GGATACCAGATTTATTTATGAAAAGAGTTGAAAGTAAT--CAAGATTGGAGTATAATGTG 18891 Query 110924 TCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983 ||||||| || |||||| |||| ||| | ||| |||| ||||||| | || || Sbjct 18892 TCCTCATGATTGCCCTGGTTTATCCGATTGTTGGGGAGAAGAATTTGAAGCATTGTATGA 18951 Query 110984 AAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAA 111043 ||||||||| | ||||| ||| |||||| | | |||||| | ||| || || Sbjct 18952 GAAATATGAACAGGAAGGTCGCTTTGTAAAACAAGTGCGAGCTCAGG---TTTTGTGGAA 19008 Query 111044 A---ATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGA-TCATA 111099 | || ||||| ||||||||||||| ||||| || || || | |||||||| |||| Sbjct 19009 AGCTATAATTGAAGCACAAGTTGAAACAGGAACACCATACATGCTTTATAAAGATTCAT- 19067 Query 111100 TTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139 || | ||| ||| || | |||| |||| || ||||| Sbjct 19068 GCAACAGAAAAAGTAACCAGAAGAATCTAGGCACCATTAA 19107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185493235141619