Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq4134 138 9e-28 seq4167 87.8 1e-12 seq1544 87.8 1e-12 >seq4134 Length=55171 Score = 138 bits (152), Expect = 9e-28 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 99927 TGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACACCGGCAAAGGTGACA 99986 ||||||| ||||| ||| | | ||||| || || || | || ||||| ||||||||| Sbjct 48430 TGAAACAGAAACCTGAGGAGCTCGCCGAGGCAGGCTTCTTCTATACCGGTCAAGGTGACA 48489 Query 99987 AAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAGCACCGACGAGCCGT 100046 | |||||| ||| | ||||| || ||| | ||||||||||| | | |||| ||||| Sbjct 48490 AGACTAAATGCTTTTACTGCGATGGAGGCTTGAAAGACTGGGAGAACGATGACGTGCCGT 48549 Query 100047 GGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCTTGTAAAGGGTTACG 100106 || | | ||||| |||||||| || |||||| | ||||||| ||| || |||||| || Sbjct 48550 GGGAGCAGCACGCGCGTTGGTTCGACCGCTGCGCCTACGTGCAGCTGGTGAAGGGTCGCG 48609 Query 100107 ACTACGTGCAGCGCGTGCTTAGCGAAGCGTGCGT 100140 | ||||| ||| ||| | | || |||||||| Sbjct 48610 AGTACGTCCAGAAGGTGATGACGGAGGCGTGCGT 48643 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697 || || |||||||| | || || | |||||||| |||||||| || || || || ||| Sbjct 48126 AATGGATTTTATTACCTCGGCCGTGGAGACGAAGTACGCTGCGCATTCTGTAAGGTGGAA 48185 Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757 || ||| ||| | || |||||||| || || || ||| | ||||||||||||||| Sbjct 48186 ATTATGAAATGGGTAGAAGGCGACGATCCTGCCAAGGACCATCAGCGATGGGCGCCGCAA 48245 Query 99758 TGCCCGTT 99765 ||||| || Sbjct 48246 TGCCCATT 48253 >seq4167 Length=57674 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||||||||||| || | ||| ||| || Sbjct 17097 ATGCAAATATTCGTCAAGACTCTGACTGGCAAGACCATAACACTAGAAGTTGAAGCCTCT 17038 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| |||||| ||||| ||||| | || ||| ||| Sbjct 17037 GATACAATTGAAAATGTCAAAGCAAAAATCCAGGACAAGGAAGGAATTCCTCCTGACCAA 16978 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||||| || |||||||| || |||||| || | ||| ||||| Sbjct 16977 CAGCGACTTATTTTCGCCGGCAAACAGTTGGAAGATGGGCGTACGTTATCCGACTACAAT 16918 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || |||||||| || || || ||||||||| Sbjct 16917 ATCCAGAAAGAATCAACGCTTCACTTAGTATTG 16885 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || |||||||| |||| |||||||||||||| | ||| ||| || Sbjct 14361 ATGCAAATCTTCGTTAAAACTCTGACGGGCAAGACCATTACACTAGAAGTCGAAGCCTCG 14302 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| ||||| |||||||| || | || || || Sbjct 14301 GACACAATCGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGGATCCCTCCAGACCAG 14242 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || | |||| ||| |||||||| || |||||| | || | ||||| ||| Sbjct 14241 CAGAGATTGATTTTTGCCGGCAAACAGTTGGAAGATGGTCGTACGCTCTCAGATTATAAC 14182 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||||| |||||||| || || || |||||| || Sbjct 14181 ATACAGAAAGAATCCACTCTCCACTTAGTACTG 14149 >seq1544 Length=14195 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| ||||||||||| ||||| ||| ||||| || ||| Sbjct 3258 ATGCAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCT 3199 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || || ||| ||||| |||||| | ||| || || Sbjct 3198 GATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 3139 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||||| || |||||||| || |||||| || | || |||||| Sbjct 3138 CAGCGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACCCTTTCTGACTACAAC 3079 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||||||||| || || || || || ||| Sbjct 3078 ATCCAAAAAGAATCCACTCTCCACTTGGTCTTG 3046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401904088545632