Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq61929 131 2e-24 seq4466 98.7 1e-14 seq57765 93.3 6e-13 >seq61929 Length=1247 Score = 131 bits (144), Expect = 2e-24 Identities = 186/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 333080 TTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACG 333139 ||||| | ||||||||||| || | |||||| || | ||||||||||| || |||||| Sbjct 634 TTGATCTTGTTGCGCACGACATCAATGCCGCGGTCATTGGACGCGTTGAGCTCCAGCACG 693 Query 333140 GCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTG 333199 || || | || || |||| || |||||||||||||| |||| | ||||||||| Sbjct 694 GCATCCTTAAATGCGGCGCCCAGCAGCGCGCGCGCCAGGCACAGGATGGTGGTGGTCTTG 753 Query 333200 CCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTG-CCGT-CG-GCGGCCAGC 333256 ||| ||||||||| ||||| | | || |||||| |||| |||| || ||| || | Sbjct 754 CCCACGCCGGGCGGGCCCGCGATTATGATGTTGGGAGCGTTGCCCGTGCGCGCGAACACC 813 Query 333257 GCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGG 333316 ||| || | || | || ||||||||| || ||||| || | | || ||| Sbjct 814 GCC---AGCCGCGACACCGTGTCCTCGTTGCCCACGATGTCACTGAACGTTACCGGCCGG 870 Query 333317 TACTTTTCGATCCATGG 333333 |||||||| |||||||| Sbjct 871 TACTTTTCTATCCATGG 887 >seq4466 Length=93423 Score = 98.7 bits (108), Expect = 1e-14 Identities = 131/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 || || || || |||| | || | ||| ||||| |||||||| || |||||||| | Sbjct 6262 GCTATTGAAACCCTGCCCTGTGTAAAGAAGAAGGCTGACTGGGCCCTGCAGTGGATCG-C 6204 Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCT 1456214 ||| | | | | ||| ||||| || || || ||| ||||| || || || ||||||| Sbjct 6203 AAGCAAGTCAGCTACA-TTTGCAGAACGCATCATCGCATTTGCTGCCGTTGAAGGCATCT 6145 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||||||| |||||||| | | ||||| ||| | |||||||| ||| | |||||||| Sbjct 6144 TTTTCTCTGGCAGTTTTGCCTCTATCTTCTGGATGAAGAAGCGTGGCTTGATGCCCGG 6087 >seq57765 Length=1122 Score = 93.3 bits (102), Expect = 6e-13 Identities = 91/116 (78%), Gaps = 6/116 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || ||||||||||||||| |||| | ||| |||| ||| || Sbjct 123 ATCTACAAGGTTCTGAAGCAGGTGCACCCCGACACCGGT-----ATC-TCCAGTAAGGCC 70 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGC 725026 ||||| |||||||||||||| || |||||||| |||| || |||| | |||| || Sbjct 69 ATGTCAATCATGAACTCGTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGC 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7169441205950198