Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4228 540 1e-148 >seq4228 Length=62806 Score = 540 bits (598), Expect = 1e-148 Identities = 1178/1749 (67%), Gaps = 26/1749 (1%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || |||||||| || || |||||||| || ||||||| ||| | ||||| | |||||| Sbjct 20067 GCAGGTTTTGTGCGAAGGTAGTACATTCCTGTTTTCAAACCCATTTTCCATGCATAGAAA 20008 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || ||| || | ||| || |||| || || | ||| ||||| | || || ||| Sbjct 20007 TGAATAGATGACAATTTACCGTAGTTTGGTTCAGCAACATGGATATTAAAGGACTGGCTT 19948 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 |||||||| || || ||||| || || ||||||| ||| || | ||| || ||||||| Sbjct 19947 TGATCGATAAATGCACCTCTGTCGGCAGCCATTTGTATTGTAGTTTTTACAGAAATTTCC 19888 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAG-GCTCGTAT--TTTGAATGGAT 68631 || | ||| ||| | | | | | || || | |||| | | || ||||||| ||| Sbjct 19887 CAGACAGTTTTATACAAGTCTCTTATTTCTTTAGGAATAGATTCAATGCTTTGAATAGAT 19828 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 ||| || | || || | ||| || || || || | ||| || | || |||||| Sbjct 19827 CCATTATTGTGGATTATAAGATTTTTCATATCTTCGTCCCATAAATCAGCTTCAGTTAAA 19768 Query 68692 AC-TCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | ||| || || |||| || | ||| || || || || || || | | ||| Sbjct 19767 TCATGTAACAAG-TGATGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGTA 19709 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || ||| | ||||| | |||||||||||||||| || || || || || || Sbjct 19708 TATGTTTGATGTAAAAGGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAGC 19649 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 ||||||||||||||| | ||||| |||||||||||||||| || || || ||||| Sbjct 19648 AGTTGGCATAGGTGCTAGCAATAGTGAATTTCTAAGACCATGTTTTGCAATCTTCTCTTT 19589 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 ||| | ||| ||||| | ||| | ||| ||||| | || || || | || Sbjct 19588 TAGTGAATCCCAGTCCCACAAATCTGTTGGGGTCTTGTTCCACATGTCATACTGCAATAT 19529 Query 68931 TCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTC 68990 || | |||||| || | ||| || ||||| ||| | || || |||| ||| Sbjct 19528 ACCTTGGCTTGCAGGGCTGCCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAATTC 19469 Query 68991 ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050 ||| || ||||| | |||||| || || |||||||| || || | | ||| | || || Sbjct 19468 ACAGCTAGCCTCCAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTA-ATTTTA 19410 Query 69051 T-GCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAA 69109 | || || || || |||| | | | || ||| ||||| || ||||| |||| Sbjct 19409 TAGCAGCTTCGCTTTCATATGGTATGCGCATTAAAACAAAAGCATCAGCTAATCCTTGAA 19350 Query 69110 CCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAAT 69169 | ||||| || || ||||| || ||| ||||||| ||| || ||||| | || ||| Sbjct 19349 CTCCAATTCCAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCACTGGGTAAA 19290 Query 69170 AATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACC-ACGTCCTTTAGT 69228 | || | ||| |||||||| || ||||| | | | || ||| | || || || | | Sbjct 19289 AGTTCACATCAATAATTTTGTTCAGATT-CTCAGTTATAGTTTTAGTGACTTCTTTCAAT 19231 Query 69229 TTGAGAAAATCAAATCGTC---CATCTATAACAAACATATTCAGTGCTACAGATGCTAGA 69285 |||| ||||| || | |||| | ||||||||||| | ||| | || |||| | Sbjct 19230 TTGATAAAATTGTATGTTTTATCATCATTTACAAACATATTTAATGCAATTGAAGCTAAA 19171 Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 || || || || || |||| | | ||||| || || || || || || || || Sbjct 19170 TTGCAGACAGCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAAAGGTTGCTG 19111 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 ||||| || || || ||||| | ||| ||||| ||| |||| || | || || ||||| Sbjct 19110 CATTTAATGGTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCTTTATAAAGC 19051 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACC----CT 69461 || | || || || ||||||| || | ||| || |||| |||||| | ||| || Sbjct 19050 ATGTATGGTGTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAAACCTGAGCT 18991 Query 69462 AGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCG 69519 ||| || || || || || | || | |||||||| ||| | ||| Sbjct 18990 CGCACTTGTT------TTACAAAGCGACCTTCCTGTTCATATTTCTCATACAATGCTTCA 18937 Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579 ||||| ||||||||| ||| || ||||| || |||| |||||||| | ||| Sbjct 18936 AATTCTTCTCCCCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTCCAA 18877 Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639 | | || | | ||||| ||||||||||| ||| || ||||| | || ||| || Sbjct 18876 TCTTGATTACTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGT 18817 Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699 || || | | |||||| || || ||||| ||||| | ||| ||||| || | || Sbjct 18816 TCCCTAGCACGTACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATG 18757 Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759 |||| |||||||||||| | |||||| || | | || |||| |||||| ||||| ||| Sbjct 18756 TCAGCATGCCATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGA 18697 Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819 || | ||| | || ||||| || || ||||| | |||||| | || |||||| || | Sbjct 18696 TCGACGTAACGCGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCGACACA 18637 Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATT 69879 |||||||| |||| |||||| | ||| | | | |||| || | || || || Sbjct 18636 CCATTTGTACCAGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGAGGCCAATC 18577 Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939 || ||||| |||||| ||||| ||||| |||| | || ||||| || || || || Sbjct 18576 CCACCTGCTGATTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTTCAATA 18517 Query 69940 CTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCA 69999 ||||||||| ||||| | ||| || || ||||| |||| || || || | || Sbjct 18516 CTATCATCTTTCATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGGTCGCTGCT 18457 Query 70000 TTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCA 70059 || | || || ||| || || || |||||||||| || | ||||||||| | | Sbjct 18456 GAGAAAAGAGTTGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTGTATGTGTTA 18397 Query 70060 ATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 |||||| || ||||| ||| |||||| || || | || | ||| | ||| ||||| Sbjct 18396 ATAGCTCCGTCAATATCTTCAC-CATGAATGCCAATGGAAACCCTCATGAGCATGTGCTG 18338 Query 70119 AGGTCGTTC 70127 || | ||| Sbjct 18337 CGGCCTTTC 18329 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 ||||| ||||| ||||||||||| || ||||| | ||| || || || || ||||| || Sbjct 16052 TTTTTGGTTTCTTTGTGTAAATTAGAAATGGCCAATCTTGCAGCAAGTATTGCATAATCT 15993 Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464 ||||| | ||||| || |||||| |||| |||||||| |||| | ||| | |||| Sbjct 15992 GGATGATCAGTAGTCATGGTTGCTGCTGTTTCGGCAGCTAAGTTATCAAGTTCCACAGTT 15933 Query 70465 GTAACTCCGTTATATAGCCCTTGAATAACTTTCA 70498 || ||||| |||| ||| || ||||||| Sbjct 15932 GTCACTCCCGAGTATATCCCACTGATGACTTTCA 15899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686163684265560