Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5130 113 5e-20 >seq5130 Length=341641 Score = 113 bits (124), Expect = 5e-20 Identities = 102/126 (81%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCA-AGACGCGTACCGAATTG 117363 ||||| |||||||| | ||| |||| |||||||| || ||| || ||||||||||| || Sbjct 332446 GTGAAGATGTAACGCGGGCTGGCAGAGTCCTTGCCGCC-GCACAGCCGCGTACCGAACTG 332388 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || | |||||||| ||||| | |||||||| |||||| |||||||||||| ||| || Sbjct 332387 ACCGCGCGGCTCCAGCAGGTTGATGTTGTTGGAGCCCACGTAGTTTTGAGCCAGGTTCAC 332328 Query 117424 AATCGT 117429 ||||| Sbjct 332327 TATCGT 332322 Score = 107 bits (118), Expect = 2e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | |||||| | |||||||| || ||||||||| || |||| Sbjct 332448 GCGTGAAGATGTAACGCGGGCTGGCAGAGTCCTTGCCGCCGCACAGCCGCGTACCGAACT 332389 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || ||||| || ||||||| |||||||| ||||||| | || ||||||| |||| Sbjct 332388 GACCGCGCGGCTCCAGCAGGTTGATGTTGTTGGAGCCCACGTAGTTTTGAGCCAGGTTCA 332329 Query 152147 CAATCGT 152153 | ||||| Sbjct 332328 CTATCGT 332322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546622414284200