Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1544 100 2e-16 seq4167 82.4 7e-11 >seq1544 Length=14195 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || || ||| |||||||| || || || || | ||| || ||| | Sbjct 3044 CGCAAGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGTCCA 3103 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | ||||||||| || || ||||||||||||||||| | ||| | || || ||| Sbjct 3104 TCTTCCAACTGTTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTG 3163 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || || || |||| || | | ||||| | ||| || |||| ||||| Sbjct 3164 TCTTGAATCTTGGCCTTGACATTCTCAATGGTATCAGAGGGCTCAACTTCCAGGGTGATG 3223 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || |||| ||||| |||||||| ||||| Sbjct 3224 GTTTTGCCAGTCAAGGTTTTGACAAAGATCTGCAT 3258 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || || ||| || ||||| ||||| || |||| ||| || ||| | Sbjct 3272 CGCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCA 3331 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | ||| ||||| || || ||||||||||||||||| | ||| | || || ||| Sbjct 3332 TCTTCCAACTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTG 3391 Query 39190 TCCATGATTTT 39200 ||| ||| || Sbjct 3392 TCCTGGATCTT 3402 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || || ||| || || || || || || |||| ||| || ||| | Sbjct 4640 CGCAAGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCA 4699 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | || ||||| || || || |||||||||||||| | ||| | || || ||| Sbjct 4700 TCTTCCAATTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTG 4759 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| ||| || |||| || | | ||||| | |||||| || | || || Sbjct 4760 TCCTGGATCTTGGCCTTGACATTCTCAATAGTATCAGAAGGCTCCACTTCTAGTGTTATT 4819 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || ||||| ||||| || || || ||||| Sbjct 4820 GTTTTGCCTGTCAGTGTTTTTACGAAAATCTGCAT 4854 >seq4167 Length=57674 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 14603 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 14662 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 14663 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 14722 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 14723 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 14782 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 14783 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 14817 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 14831 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 14890 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 14891 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 14950 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 14951 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 15010 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 15011 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 15045 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 15059 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 15118 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 15119 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 15178 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 15179 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 15238 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 15239 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 15273 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 15287 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 15346 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 15347 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 15406 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 15407 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 15466 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 15467 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 15501 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 15515 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 15574 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 15575 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 15634 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 15635 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 15694 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 15695 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 15729 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 15743 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 15802 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 15803 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 15862 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 15863 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 15922 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 15923 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 15957 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 15971 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 16030 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 16031 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 16090 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 16091 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 16150 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 16151 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 16185 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 16199 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 16258 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 16259 TCTTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 16318 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 16319 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 16378 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||||||||| Sbjct 16379 GTCTTTCCAGTCAGAGTCTTGACGAAGATTTGCAT 16413 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || || ||| ||||| || || |||||||| | ||||| || | Sbjct 16427 CGTAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAATCTGAGAGTGTGCGACCA 16486 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| || || || | | ||||||||| | ||| | | ||||||| Sbjct 16487 TCTTCCAGCTGTTTGCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 16546 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||||| ||| | | | | || || | ||| || |||| || || Sbjct 16547 TCTTGAATTTTGGCTTTCACATTTTCGATTGTGTCAGAAGCCTCGACTTCCAAAGTAATG 16606 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| ||||| ||||| |||||||| Sbjct 16607 GTCTTGCCAGTCAGGGTTTTGACAAAAATTTGCAT 16641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429091304385227