Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq84480 215 4e-51 seq2172 208 6e-49 >seq84480 Length=6514 Score = 215 bits (238), Expect = 4e-51 Identities = 482/716 (67%), Gaps = 7/716 (1%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| |||||||||||||| ||| | || || ||||| ||| ||||| | Sbjct 5435 GCATACTTCGTCGAATGGGGTGTCTACCCGAGGAAGTTCCCCGTTGACCGTGTGCCTATC 5494 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 |||||| || | ||| | || |||||||| || ||||| || || || || ||||||||| Sbjct 5495 CCCAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGGCATCAAC 5554 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | ||| ||| |||||||| | ||| ||||| |||| ||| |||| | Sbjct 5555 GACAGTTTGAAAGAGATTGAAGGCAGTTTCCAAGCTCTGCAAAGATCATGCAGCGGCAGG 5614 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || |||||||||||||| || || |||||| || | || ||||| || || || Sbjct 5615 GAAGACTTCAAAGTGTCCATCCATGATCCTTGGGCTGCTCTTCAGAAACCACAGAAGGGT 5674 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 || | ||||||||||| ||||| |||||||| || || |||||| | ||| | Sbjct 5675 TTGGGTTCATGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTTGAAACAG 5734 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500 || | || || | || || || || || | || || ||||| || | || || ||| Sbjct 5735 GCGAGACCAGACCTGAAGATCCTTCCTTCTGTTGGTGGATGGACCCTGGCCGATCCCTTT 5794 Query 109501 TATTTTATGCA-CGATTCGGCGAAAAG-AGCCACATTCGTTGAATCGGTGCGCGAATTTT 109558 | | || | || ||| || || || |||| | ||||| | || ||| || || Sbjct 5795 T-TCTTCTTCACCGACAAGGAAAAGAGAAGCCGC-TTCGTCGCCTCAGTGAAGGACTTCC 5852 Query 109559 TACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGG 109618 | | ||||||||||| || || || ||||||||||||||||| || || || |||| Sbjct 5853 TCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGTAAGG 5912 Query 109619 GTGCCAATCCGAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTTAA 109678 | ||||| || || || | | || ||| | ||| ||| | | || | | Sbjct 5913 GAGCCAACCCCGACCTAGGTG--GTCCCG-AAGACGGTCAAATCTACGTGCAGCTGATGA 5969 Query 109679 AAGAGTTGCGCGCCATGTTGGACGACTTGCAAACGGCCACCAACAAAACGTACGAATTGA 109738 | || ||| | | |||||| |||| || | | || || | |||||| ||| Sbjct 5970 AGGAATTGAGAGAGATGTTGAACGAGCTGTCAGCCAAGACTGGAAAGAAATACGAACTGA 6029 Query 109739 CGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGGCGCAAC 109798 | ||||| ||| | |||| || || ||| | || || || ||| | | || || | Sbjct 6030 CCTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTTGTTGACTACAAGGCCGCTCAGC 6089 Query 109799 AATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAAAC 109854 | || |||| | || ||||| |||| ||||| ||||| || || ||||| ||| Sbjct 6090 AGTACATGGATCACATCTTTTTGATGAGCTACGACTTCAAGGGTGCCTGGTCCAAC 6145 >seq2172 Length=16819 Score = 208 bits (230), Expect = 6e-49 Identities = 485/722 (67%), Gaps = 17/722 (2%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| |||||||||||||| ||| | || ||||| || ||| ||||| | Sbjct 7277 GCATACTTCGTCGAATGGGGTGTCTACCTGAGGAAGTTTCCAGTTGACCGCGTGCCCATC 7336 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| || | ||| | || |||||||| || ||||| || || || || || |||||| Sbjct 7337 CCTAATCTAACTCATCTTCTTTACGGTTTCATCCCAATTTGCGGTGGAGATGGTATCAAC 7396 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | | ||| ||| |||||||| | | ||||| ||| ||| | || | Sbjct 7397 GACAGCTTGAAACAGATTGAAGGCAGTTTCCAAATTCTGCAAAAATCATGCAGGGGCAGG 7456 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || ||||||||||| || || || |||||| || | || ||||| ||||| || Sbjct 7457 GAAGACTTCAAAGTGTCAATCCATGATCCTTGGGCTGCTCTTCAGAAACCACAAAAGGGT 7516 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 |||| || ||||||||||| ||||| |||||||| || || |||||| | ||| | Sbjct 7517 TTGACTGCCTGGAACGAGCCTTACAAGGGCAACTTCGGCCAGTTGATGATGTTAAAACAG 7576 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500 || | || || | || || || || || | || || ||||| || | || || ||| Sbjct 7577 GCGAGACCAGACCTGAAGATCCTTCCTTCAGTTGGTGGATGGACCCTGGCCGATCC-TTT 7635 Query 109501 TATTTTATGCA-CGATTCGGCGAAAAGAGCCAC--ATTCGTTGAATCGGTGCGCGAATTT 109557 | || | || ||| | |||||||| || ||||| | || ||| || || Sbjct 7636 CTTCTTCTTCACCGA--CAAGGAAAAGAGAAACCGCTTCGTCGCCTCAGTGAAGGACTTC 7693 Query 109558 TTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAG 109617 | | ||||||||||| || || || ||||||||||||||||| || || || ||| Sbjct 7694 CTCGAGACCTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGTAAG 7753 Query 109618 GGTGCCAATCCGAGTCTCGGCG---ACGCA-ACGCGCGACAGCAAAACGTACATTGCGTT 109673 || |||||||| | || || | || | ||| | ||| | |||| || | | Sbjct 7754 GGAGCCAATCCCAACCTTGGTGGTCCCGAAGACG-GTCACATC--TACGTCCA----GCT 7806 Query 109674 GTTAAAAGAGTTGCGCGCCATGTTGGACGACTTGCAAACGGCCACCAACAAAACGTACGA 109733 | | || || ||| | | |||||| |||| || | | || || | ||||| Sbjct 7807 GATGAAGGAATTGAGAGAAATGTTGAACGAGCTGTCAGCCAAGACTGGAAAGAAATACGA 7866 Query 109734 ATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGGC 109793 | |||| ||||| ||||| |||| || || ||| | || || || ||| | | || Sbjct 7867 ACTGACCTCAGCCATCAGCGCTGGTTGGGACAAGATTCAGGTCGTAGACTACAAGGCCGC 7926 Query 109794 GCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAAA 109853 || || || ||||| | || || || |||| ||||| ||||| || | ||||| || Sbjct 7927 TCAGCAGTACATGGACCATATCTTCTTGATGAGCTACGACTTCAAGGGTTCCTGGTCCAA 7986 Query 109854 CA 109855 || Sbjct 7987 CA 7988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409227534928761