Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4228 544 1e-149 seq4466 114 2e-20 >seq4228 Length=62806 Score = 544 bits (602), Expect = 1e-149 Identities = 1181/1750 (67%), Gaps = 28/1750 (2%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || |||||||| || || |||||||| || ||||| | ||||| ||||| | |||||| Sbjct 20067 GCAGGTTTTGTGCGAAGGTAGTACATTCCTGTTTTCAAACCCATTTTCCATGCATAGAAA 20008 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || || || ||| || | || || || | ||| ||||| | ||||| ||| Sbjct 20007 TGAATAGATGACAATTTACCGTAGTTTGGTTCAGCAACATGGATATTAAAGGACTGGCTT 19948 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 |||||||| || || ||||| || || ||||||| ||| | || ||| || ||||||| Sbjct 19947 TGATCGATAAATGCACCTCTGTCGGCAGCCATTTGTATTGTAGTTTTTACAGAAATTTCC 19888 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG-GTTTGTAT--TTTGAATGGAA 77039 || | |||||| | | | | | || || | |||| | || || ||||||| || Sbjct 19887 CAGACAGTTTTATACAAGTCTCTTATTTCTTTAGGAATAGATTCAATGCTTTGAATAGAT 19828 Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099 ||| || || || ||| || ||||| || | ||| || | || |||||| Sbjct 19827 CCATTATTGTGGATTATAAGATTTTTCATATCTTCGTCCCATAAATCAGCTTCAGTTAAA 19768 Query 77100 AC-TCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTA 77158 | | ||| || ||| |||| || | ||| || || || ||||| || | | ||| Sbjct 19767 TCATGTAACAAG-TGATGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGTA 19709 Query 77159 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGC 77218 || || ||| | ||||| | |||||||| |||||||| || || || || ||||| Sbjct 19708 TATGTTTGATGTAAAAGGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAGC 19649 Query 77219 AGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 77278 ||||||||||||||| | ||||| |||||| ||||||||| || || || ||||| Sbjct 19648 AGTTGGCATAGGTGCTAGCAATAGTGAATTTCTAAGACCATGTTTTGCAATCTTCTCTTT 19589 Query 77279 TAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338 ||| | | ||| ||||| | ||||| || | ||| | || || || | || Sbjct 19588 TAGTGAATCCCAGTCCCACAAATCTGTTGGGGTCTTGTTCCACATGTCATACTGCAATAT 19529 Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398 || | || ||| || | ||| || ||||| ||| | | || |||| ||| Sbjct 19528 ACCTTGGCTTGCAGGGCTGCCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAATTC 19469 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 ||| || || |||| ||| || || || |||||||| || || | | ||| | || || Sbjct 19468 ACAGCTAGCCTCCAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTA-ATTTTA 19410 Query 77459 T----GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCT 77514 | ||||| || ||| | || | | | || ||| ||||| |||||||| | Sbjct 19409 TAGCAGCTTCG---CTTTCATATGGTATGCGCATTAAAACAAAAGCATCAGCTAATCCTT 19353 Query 77515 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGAT 77574 |||||||||| ||||| ||||| || ||| |||| || |||| || ||||| | || | Sbjct 19352 GAACTCCAATTCCAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCACTGGGT 19293 Query 77575 AATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACC-ACGTCCTTT 77633 || | || | || |||||||| || ||||| || | || ||| | || || || Sbjct 19292 AAAAGTTCACATCAATAATTTTGTTCAGATT-CTCAGTTATAGTTTTAGTGACTTCTTTC 19234 Query 77634 AGTTTAAGAAAATCAAATCTTC---CATCTATAACAAACATGTTCAAAGCTATAGATGCT 77690 | ||| | ||||| || || |||| | |||||||| || || || || || ||| Sbjct 19233 AATTTGATAAAATTGTATGTTTTATCATCATTTACAAACATATTTAATGCAATTGAAGCT 19174 Query 77691 AGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTA 77750 | ||| || || || || |||| || | ||||| || || || || || || || Sbjct 19173 AAATTGCAGACAGCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAAAGGTTG 19114 Query 77751 CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAA 77810 || ||||| || ||||| ||||| | ||||| || ||| | |||||||| || |||||| Sbjct 19113 CTGCATTTAATGGTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCTTTATAA 19054 Query 77811 AGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA 77870 || || | || || || ||||||| |||| ||| || |||| |||||| | || | Sbjct 19053 AGCATGTATGGTGTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAAACCTGA 18994 Query 77871 GCTTTTATCATAGATTTGTATCGCCTCTCTCTT--TCATATTGAGTATATAGCCGTTCAA 77928 ||| | | | ||| | || | || | ||||||| ||| | ||||| Sbjct 18993 GCTCGCAC--TTGTTTTACAAAGCGACCTTCCTGTTCATATTTCTCATACAATGCTTCAA 18936 Query 77929 ATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGT 77988 |||| ||||||||| ||| || |||||||| |||| || ||||| | ||| | Sbjct 18935 ATTCTTCTCCCCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTCCAAT 18876 Query 77989 CACCATCTTCCTT-AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 78047 | || | | || ||||| ||||||||| | ||| |||||||||| ||| ||| || Sbjct 18875 CTTGAT-TACTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGT 18817 Query 78048 TCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATA 78107 || | | | |||||| || || ||||||||||| | ||| ||||| || | || Sbjct 18816 TCCCTAGCACGTACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATG 18757 Query 78108 TCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGA 78167 |||| |||||||||||| | |||||| || | | ||||||| |||||||||||| ||| Sbjct 18756 TCAGCATGCCATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGA 18697 Query 78168 TCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTT 78227 || | || | || ||||| || |||||||| ||||| || | || ||| || || Sbjct 18696 TCGACGTAACGCGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCGACACA 18637 Query 78228 CCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTA 78285 |||||||| |||| |||||| | || | | | ||| | | |||| | || | Sbjct 18636 CCATTTGTACCAGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGG--AGGCCAA 18579 Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345 | || ||||| ||||| ||||| || || |||| | ||||| || || || || | Sbjct 18578 TCCCACCTGCTGATTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTTCAA 18519 Query 78346 TACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 78405 |||| ||||| ||||| | ||| || || ||||| |||| || | || ||| Sbjct 18518 TACTATCATCTTTCATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGGTCGCTG 18459 Query 78406 CATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTT 78465 | || | || || |||||| ||||| |||||||||| |||| ||||||||| | Sbjct 18458 CTGAGAAAAGAGTTGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTGTATGTGT 18399 Query 78466 CAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525 ||||||| || || || |||||| || | | || | ||| | ||| |||| Sbjct 18398 TAATAGCTCCGTCAATATCTTCACCATGAATGCCAATGGAAACCCTCATGAGCATGTGCT 18339 Query 78526 GAGGTCTTTC 78535 | || ||||| Sbjct 18338 GCGGCCTTTC 18329 >seq4466 Length=93423 Score = 114 bits (126), Expect = 2e-20 Identities = 141/191 (74%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 |||||||| | ||||| || || | ||| || || | || ||| ||||| || || Sbjct 6087 CCGGGCATCAAGCCACGCTTCTTCATCCAGAAGATAGAGGCAAAACTGCCAGAGAAAAAG 6146 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTG 48316 |||||||| ||||| ||||||||| | | | ||| | ||| ||| ||| ||| | Sbjct 6147 ATGCCTTCAACGGCAGCAAATGCGATGATGCGTTCTGCAAATGTAGCTGACTTGCTTGCG 6206 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376 |||||| | | ||||| |||||||||||||||||||| |||| ||||| |||||||| Sbjct 6207 -ATCCACTGCAGGGCCCAGTCAGCCTTCTTCTTTACACAGGGCAGGGTTTCAATAGCATT 6265 Query 48377 AAAGAGAAAGT 48387 || || |||| Sbjct 6266 GAACAGGAAGT 6276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693915266702560