Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4228 554 6e-153 seq5451 98.7 1e-15 seq4466 93.3 6e-14 >seq4228 Length=62806 Score = 554 bits (614), Expect = 6e-153 Identities = 1188/1753 (68%), Gaps = 34/1753 (2%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || |||||||| || || |||||||| || ||||| | ||||| ||||| | |||||| Sbjct 20067 GCAGGTTTTGTGCGAAGGTAGTACATTCCTGTTTTCAAACCCATTTTCCATGCATAGAAA 20008 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || || | ||| || | || || || | ||| ||||| | ||||| ||| Sbjct 20007 TGAATAGATGACAATTTACCGTAGTTTGGTTCAGCAACATGGATATTAAAGGACTGGCTT 19948 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 |||||||| || || ||||| || || ||||||| ||| | || ||| || ||||||| Sbjct 19947 TGATCGATAAATGCACCTCTGTCGGCAGCCATTTGTATTGTAGTTTTTACAGAAATTTCC 19888 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGAT-TTGTAT--TTTGAATGGAT 75634 || | |||||| | | | | | || || | |||| | || || ||||||| ||| Sbjct 19887 CAGACAGTTTTATACAAGTCTCTTATTTCTTTAGGAATAGATTCAATGCTTTGAATAGAT 19828 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 || || || || ||| || || || || | ||| || | || |||||| Sbjct 19827 CCATTATTGTGGATTATAAGATTTTTCATATCTTCGTCCCATAAATCAGCTTCAGTTAAA 19768 Query 75695 AC-TCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTA 75753 | | ||| || ||| |||| || | ||| || || || ||||| || | || ||| Sbjct 19767 TCATGTAACAAG-TGATGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGTA 19709 Query 75754 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGC 75813 || || ||| | ||||| | |||||||| |||||||| || || || || ||||| Sbjct 19708 TATGTTTGATGTAAAAGGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAGC 19649 Query 75814 AGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 75873 ||| ||||||||||| | ||||| |||||| ||||||||| || || || ||||| Sbjct 19648 AGTTGGCATAGGTGCTAGCAATAGTGAATTTCTAAGACCATGTTTTGCAATCTTCTCTTT 19589 Query 75874 TAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAAT 75933 ||| | | ||| ||||| | ||||| ||| | ||| | || || || | || Sbjct 19588 TAGTGAATCCCAGTCCCACAAATCTGTTGGGGTCTTGTTCCACATGTCATACTGCAATAT 19529 Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 || | ||| ||| || | ||| || || || || | ||| || |||| ||| Sbjct 19528 ACCTTGGCTTGCAGGGCTGCCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAATTC 19469 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT- 76052 || || ||||| | ||||| || || |||||||| || || | | ||| | || || Sbjct 19468 ACAGCTAGCCTCCAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTA-ATTTTA 19410 Query 76053 --GC-GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCT 76109 || ||||| || ||| | || | | | || ||| ||||| |||| ||| | Sbjct 19409 TAGCAGCTTCG---CTTTCATATGGTATGCGCATTAAAACAAAAGCATCAGCTAATCCTT 19353 Query 76110 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGT 76169 |||||||||| ||||| ||||| || ||| |||| || ||| || ||||| | |||| Sbjct 19352 GAACTCCAATTCCAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCACTGGGT 19293 Query 76170 AATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACC-ACGTCCTTT 76228 || | || | ||| |||||||| || ||||| || | || ||| | || || || Sbjct 19292 AAAAGTTCACATCAATAATTTTGTTCAGATT-CTCAGTTATAGTTTTAGTGACTTCTTTC 19234 Query 76229 AGTTTGAGAAAATCAAATTTTC---CATCTATCACAAACATATTAAGAGCTATAGATGCT 76285 | ||||| ||||| || || |||| | ||||||||||| | || || || ||| Sbjct 19233 AATTTGATAAAATTGTATGTTTTATCATCATTTACAAACATATTTAATGCAATTGAAGCT 19174 Query 76286 AGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTA 76345 | ||| || || || || |||| || | ||||| || || || ||||| || || Sbjct 19173 AAATTGCAGACAGCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAAAGGTTG 19114 Query 76346 CTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAA 76405 || || || || || || ||||| | ||||| || ||| |||| ||||| || |||||| Sbjct 19113 CTGCATTTAATGGTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCTTTATAA 19054 Query 76406 AGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA 76465 || | | || ||||| ||||||| |||| ||| || |||| |||||| | || | Sbjct 19053 AGCATGTATGGTGTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAAACCTGA 18994 Query 76466 GCTT----TTATTATAGATTTGTATCG--CTTCTCTCTTTCATATTGTGTATATAACCGT 76519 ||| || || || | | || |||| || || |||||| ||| || | Sbjct 18993 GCTCGCACTTGTTTTACAA----AGCGACCTTC-CTGTT-CATATTTCTCATACAATGCT 18940 Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||| ||| |||||||| || |||| |||||||| | | Sbjct 18939 TCAAATTCTTCTCCCCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTC 18880 Query 76580 CACTCACCATCTTCCTT-AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 || || || | | || ||| | ||||||||| | ||| |||||||||| ||| ||| Sbjct 18879 CAATCTTGAT-TACTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAA 18821 Query 76639 TAGATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCA 76697 || || | | | ||| |||||| || || ||||||||||| | ||| || || || | Sbjct 18820 CAGTTCCCTAGCACGTAC-TTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAA 18762 Query 76698 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTC 76757 || |||| |||||||||||| | |||||| || | | || |||| ||||||||||| Sbjct 18761 ATATGTCAGCATGCCATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTC 18702 Query 76758 CCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG 76817 | ||||| | || | || ||||| || |||||||| ||||| || | || || || | Sbjct 18701 CTTGATCGACGTAACGCGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCG 18642 Query 76818 ATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGC 76877 | ||||||||| |||| |||||| | || | | |||| || | |||| Sbjct 18641 ACACACCATTTGTACCAGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGAGGC 18582 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | || || ||||| |||||| ||||| ||||| |||| | || ||||| || || | Sbjct 18581 CAATCCCACCTGCTGATTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTT 18522 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | ||||||||||| ||||| | ||| || || ||||| |||| || | || Sbjct 18521 CAATACTATCATCTTTCATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGGTCG 18462 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 |||| || | || || |||||| || || |||||||||| |||| |||||||| Sbjct 18461 CTGCTGAGAAAAGAGTTGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTGTATG 18402 Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 | | |||| || | || ||||| |||||| || | | || | ||| | ||| | Sbjct 18401 TGTTAATAGCTCCGTCAATATCTTCACCATGAATGCCAATGGAAACCCTCATGAGCATGT 18342 Query 77118 GCTGAGGTCGTTC 77130 |||| || | ||| Sbjct 18341 GCTGCGGCCTTTC 18329 >seq5451 Length=979821 Score = 98.7 bits (108), Expect = 1e-15 Identities = 184/266 (69%), Gaps = 12/266 (5%) Strand=Plus/Plus Query 169529 TTTCTGTTATGACTCCTATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGG 169588 ||||| ||||||||||| | || |||||||| ||| | ||| | || || | | || Sbjct 213638 TTTCTCTTATGACTCCTGTGCTACCAATGTTGGCTGAAGCTTGCAAATCAGTGGAAATGG 213697 Query 169589 CATTTAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGC 169648 || | ||||| | ||| ||| ||||| ||||| | ||||||||||||||| |||||| Sbjct 213698 CAATGAAAAAGTGTCCCAATGGAATGTTCTCAGAAATAAAATATGACGGTGAAAGAGTGC 213757 Query 169649 AAGTTCATAAAAA---TAATAA---CAACTTTGCCTTCTTTAGTAGAAATATGAAACCAG 169702 |||| || ||||| ||| | ||| | | |||| || || || ||||||| Sbjct 213758 AAGTGCACAAAAAAGGGAATGAGTTCAAATAT---TTCTCAAG-AGCGTTA--AAACCAG 213811 Query 169703 TTTTACCACATAAAGTTGATTATCTCAAAGAATACCTTCCTAAAGCATTTAAAAAAGCTA 169762 || | |||| ||||| | || |||| || || | || |||| || ||||| || Sbjct 213812 TTATGGCACACAAAGTCAGTCATTTCAAGGATTATTTACCGCAAGCTTTCCCAAAAGGTA 213871 Query 169763 CGTCTATTATCTTGGATTCTGAAATT 169788 || || || ||||| ||||| || Sbjct 213872 CGGACATGATACTGGATGCTGAAGTT 213897 >seq4466 Length=93423 Score = 93.3 bits (102), Expect = 6e-14 Identities = 136/191 (71%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 || ||||| | |||||||| || | ||| || |||| || ||| ||||| || || Sbjct 6087 CCGGGCATCAAGCCACGCTTCTTCATCCAGAAGATAGAGGCAAAACTGCCAGAGAAAAAG 6146 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCC----GTAACTGGCATCATTATG 46805 |||||||| || || || ||||||| | | ||| | ||| ||| | | || | Sbjct 6147 ATGCCTTCAACGGCAGCAAATGCGATGATGCGTTCTGCAAATGTAGCTGACTTGCTTGCG 6206 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 | ||||| | ||||| |||||||| ||||||||||| |||| ||||| |||||||| Sbjct 6207 A-TCCACTGCAGGGCCCAGTCAGCCTTCTTCTTTACACAGGGCAGGGTTTCAATAGCATT 6265 Query 46866 AAAGAGAAAGT 46876 || || |||| Sbjct 6266 GAACAGGAAGT 6276 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959 ||||| || || | ||| ||||| || || || | || || ||||| ||||| || Sbjct 6574 TATGTGTCAATGAGCAGAGAGTACATCTCAGAGTGTACATTCTCCATAGCAATCTGGAAG 6633 Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCT-CTGTACAAAATCGTTCAGACAAATT 47018 || || || |||||||||||||| | || || | |||| | || ||||| || || Sbjct 6634 CCATAGAAGCATCTTGCTTCAGTCACTTGCACTTCCTGT-GAGAAGCGTTCCACCAGGTT 6692 Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| || || || || |||||||| || |||| |||||||||||| || Sbjct 6693 CTCATTGACAATGCCGTCCGAGGCAGCAAAGAAGGCCAGTACATGTTTAATGAA 6746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712161053321280