Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4140 178 3e-39 seq4167 167 6e-36 seq1544 159 8e-34 seq4794 93.3 1e-13 >seq4140 Length=56097 Score = 178 bits (196), Expect = 3e-39 Identities = 163/205 (80%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || ||||| ||||||||||||||||| |||||| Sbjct 50223 CAGATCTTCGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTGGAGGCTTCAGAC 50282 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| |||||| |||||||| || |||||||| || || ||||| Sbjct 50283 ACTATTGAGAATGTCAAAGCAAAGATCCAGGACAAGGAGGGAATCCCACCAGATCAGCAG 50342 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||||||| || |||||| | || ||||| | |||||| | || || ||| || Sbjct 50343 CGACTTATCTTCGCTGGTAAACAGTTGGAGGATGGCCGCACTCTTTCTGACTACAACATC 50402 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 50403 CAGAAGGAATCCACCCTTCA-CTTG 50426 >seq4167 Length=57674 Score = 167 bits (184), Expect = 6e-36 Identities = 177/233 (76%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| || |||| | || |||||||| ||| | || || ||||| ||||| | |||| Sbjct 18017 AGGTCAACATGC---AGATCTTCGTGAAGACTTTGACGGGGAAAACAATCACTTTGGAGG 17961 Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029 ||||| ||| || |||||||| || || ||| |||||||| ||||| ||||| || | Sbjct 17960 TGGAACCCTCTGATACCATCGAAAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATTC 17901 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 |||| |||||||| || | |||||||||||||| || || ||||||||| | ||||| Sbjct 17900 CTCCCGACCAGCAGAGATTGATCTTCGCCGGAAAGCAACTGGAAGATGGACGCACTCTAT 17841 Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || |||| || ||||| ||||| || || || || | |||||| Sbjct 17840 CCGACTACAATATCCAGAAGGAATCTACACTTCACCTGGTGCTGCGTCTCAGA 17788 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 14814 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 14755 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 14754 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 14695 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 14694 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 14635 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 14634 CAGAAAGAATCCACACTCCA-CTTGGTT 14608 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 15042 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 14983 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 14982 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 14923 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 14922 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 14863 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 14862 CAGAAAGAATCCACACTCCA-CTTGGTT 14836 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 15270 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 15211 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 15210 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 15151 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 15150 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 15091 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 15090 CAGAAAGAATCCACACTCCA-CTTGGTT 15064 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 15498 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 15439 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 15438 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 15379 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 15378 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 15319 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 15318 CAGAAAGAATCCACACTCCA-CTTGGTT 15292 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 15726 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 15667 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 15666 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 15607 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 15606 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 15547 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 15546 CAGAAAGAATCCACACTCCA-CTTGGTT 15520 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 15954 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 15895 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 15894 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 15835 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 15834 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 15775 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 15774 CAGAAAGAATCCACACTCCA-CTTGGTT 15748 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 16182 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 16123 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 16122 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 16063 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 16062 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 16003 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 16002 CAGAAAGAATCCACACTCCA-CTTGGTT 15976 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || || || ||| Sbjct 16410 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTCGAGGCTTCTGAC 16351 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| |||||||| || |||||||| Sbjct 16350 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCCCCAGACCAGCAG 16291 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 16290 AGATTGATCTTCGCCGGCAAACAGCTAGAAGATGGTCGCACACTCTCAGATTATAACATC 16231 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| ||||| || |||| || Sbjct 16230 CAGAAAGAATCCACACTCCA-CTTGGTT 16204 Score = 149 bits (164), Expect = 2e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || ||||||||||| | || || ||| |||||| Sbjct 13902 CAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACATTAGAAGTTGAAGCTTCAGAC 13843 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || ||| || || || || ||||| || ||||| || |||||||| Sbjct 13842 ACAATCGAGAATGTGAAAGCCAAAATCCAAGATAAAGAGGGGATCCCACCAGACCAGCAG 13783 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || ||||| ||||| ||| | || || ||||||| || || Sbjct 13782 AGGTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGCACACTCTCCGATTACAATATC 13723 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 ||||| ||||| ||||| ||| | || || || Sbjct 13722 CAAAAGGAATCTACACTTCATTTAGTATTAAG 13691 Score = 149 bits (164), Expect = 2e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || || || || || || ||||| ||| ||| ||| Sbjct 17322 CAAATCTTCGTCAAGACTTTGACTGGCAAGACCATTACACTAGAGGTCGAACCCTCTGAC 17263 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||||||||| |||||||| ||||| |||||||| Sbjct 17262 ACAATTGAAAATGTTAAAGCGAAAATTCAGGACAAGGAAGGAATACCTCCAGACCAGCAG 17203 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || || | ||||||||| || Sbjct 17202 AGATTGATCTTCGCCGGTAAACAGCTGGAAGATGGTCGCACGCTCTCTGATTATAACATC 17143 Query 178104 CAAAAAGAATCAACACTGCA 178123 ||||| || || || || || Sbjct 17142 CAAAAGGAGTCTACTCTTCA 17123 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || || || || || || || ||| ||| || Sbjct 17094 CAAATATTCGTCAAGACTCTGACTGGCAAGACCATAACACTAGAAGTTGAAGCCTCTGAT 17035 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||| || |||||||| |||||||| ||||| ||||| || Sbjct 17034 ACAATTGAAAATGTCAAAGCAAAAATCCAGGACAAGGAAGGAATTCCTCCTGACCAACAG 16975 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||| |||||||| |||||| | |||||||| | || | |||| || || || Sbjct 16974 CGACTTATTTTCGCCGGCAAACAGTTGGAAGATGGGCGTACGTTATCCGACTACAATATC 16915 Query 178104 CAAAAAGAATCAACACTGCA 178123 || ||||||||||| || || Sbjct 16914 CAGAAAGAATCAACGCTTCA 16895 Score = 132 bits (146), Expect = 1e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| | || || ||||| || || | || || || |||||| Sbjct 17550 CAAATCTTTGTCAAAACATTGACTGGTAAAACAATAACTTTAGAAGTTGAGCCATCAGAC 17491 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || ||| || || || ||||| ||||| || || || ||||||||| Sbjct 17490 ACAATCGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCAGACCAGCAA 17431 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||| |||||||| | || ||| ||||||| || | Sbjct 17430 CGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACGCTTTCCGATTACAATATT 17371 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 17370 CAGAAGGAATCTACTCTTCAT 17350 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || ||||| || || || | || || ||| || ||| Sbjct 14586 CAAATCTTCGTCAAGACTCTGACTGGAAAGACCATTACTTTGGAAGTTGAAGCTTCTGAC 14527 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| |||||||| ||||||||||| |||||||| Sbjct 14526 ACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATCCCTCCAGACCAGCAG 14467 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||| | ||||| || | || | | || || || | Sbjct 14466 AGATTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACATTGTCAGACTACAATATT 14407 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||| || ||||| | ||||| Sbjct 14406 CAAAAGGAATCTACGTTGCATTTAGTTTT 14378 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| | ||||| ||||| ||||| | ||||| || || ||| Sbjct 17778 CAGATTTTCGTTAAAACATTGACAGGCAAAACCATCACATTGGAGGTTGAGCCTTCCGAC 17719 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || || || || |||||||| || |||||||| Sbjct 17718 ACAATTGAAAATGTCAAGGCCAAGATCCAAGATAAGGAGGGAATCCCCCCAGACCAGCAG 17659 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| |||||||| |||||||| | || | |||| || || || Sbjct 17658 CGATTGATCTTCGCCGGCAAACAGCTTGAAGATGGGCGCACATTATCCGACTACAATATC 17599 Query 178104 CAAAAAGAATCAACACTGCA 178123 || || ||||| || || || Sbjct 17598 CAGAAGGAATCTACGCTCCA 17579 >seq1544 Length=14195 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || || || |||||||||||||| ||| || ||| Sbjct 5079 CAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAACCTTCTGAC 5020 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| |||||||| || || ||||| |||||||| |||||||| Sbjct 5019 ACTATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAAGGCATCCCTCCAGACCAGCAG 4960 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| || ||||| || |||||||| | || || | ||||| ||| || Sbjct 4959 CGACTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGTACCCTCTCTGATTACAACATC 4900 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || |||||||| Sbjct 4899 CAGAAGGAATCCACTCTCCATCTTGT 4874 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| | || || ||||| |||||||| || || || ||| || Sbjct 3255 CAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCTGAT 3196 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| ||||| |||||||| ||||| ||||| ||||| || |||||||| Sbjct 3195 ACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAGCAG 3136 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| |||||| | ||||||||| | || ||| | || || ||| || Sbjct 3135 CGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACCCTTTCTGACTACAACATC 3076 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||||||||| || || || | || ||| | ||| Sbjct 3075 CAAAAAGAATCCACTCTCCACTTGGTCTTGCGTCTC 3040 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| | || || || || |||||||||||||| ||| || ||| Sbjct 3483 CAGATTTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCGGAC 3424 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct 3423 ACGATTGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAGCAG 3364 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||| | ||||||||| | || ||| |||| || || || Sbjct 3363 CGTCTTATCTTCGCCGGCAAGCAGTTGGAAGATGGACGCACCCTTTCCGACTACAATATC 3304 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| ||||| || || || | || ||| | ||| Sbjct 3303 CAAAAGGAATCCACCCTTCACTTGGTCTTGCGTCTC 3268 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| | || || || || |||||||||||||| ||| || ||| Sbjct 3711 CAGATTTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCGGAC 3652 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct 3651 ACGATTGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAGCAG 3592 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||| | |||||||| | || ||| | || || ||| | Sbjct 3591 CGTCTTATCTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACCCTTTCTGACTACAACATT 3532 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || |||||||| Sbjct 3531 CAGAAGGAATCTACTCTCCATCTTGT 3506 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| | || || || || |||||||||||||| ||| || ||| Sbjct 3939 CAGATCTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCTGAC 3880 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| ||||||||||| || ||||| ||||| || ||||| || Sbjct 3879 ACTATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAACAG 3820 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||| | |||||||| | || ||| | || || ||| | Sbjct 3819 CGTCTTATCTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACCCTTTCTGACTACAACATT 3760 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || |||||||| Sbjct 3759 CAGAAGGAATCTACTCTCCATCTTGT 3734 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || || || |||||||| ||||| ||| || ||| Sbjct 4167 CAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAACCTTCCGAC 4108 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| |||||||| ||||| ||||| ||||| || |||||||| Sbjct 4107 ACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAGCAG 4048 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || || | ||||||||| | || || | || || || || Sbjct 4047 CGTCTTATCTTCGCCGGTAAGCAATTGGAAGATGGACGCACCCTCTCTGACTACAATATC 3988 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || |||||||| Sbjct 3987 CAGAAGGAATCCACTCTCCATCTTGT 3962 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| | || || || || |||||||||||||| ||| || ||| Sbjct 4395 CAGATCTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCTGAC 4336 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| |||||||| ||||| ||||| ||||| || |||||||| Sbjct 4335 ACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCCGACCAGCAG 4276 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||| | |||||||| | || ||| |||| || || || Sbjct 4275 CGTCTGATCTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACGCTTTCCGACTACAATATC 4216 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| ||||| || || || | || ||| | ||| Sbjct 4215 CAAAAGGAATCCACCCTTCACTTGGTCTTGCGTCTC 4180 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| || ||||| ||||| || || || || ||||| || || Sbjct 4851 CAGATTTTCGTAAAAACACTGACAGGCAAAACAATAACACTAGAAGTGGAGCCTTCTGAT 4792 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct 4791 ACTATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAGCAG 4732 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || | ||||||||| | || ||| |||| || ||| || Sbjct 4731 CGTCTGATCTTCGCCGGCAAGCAATTGGAAGATGGACGCACCCTTTCCGACTACAACATC 4672 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || ||||| || || || | || ||| | ||| Sbjct 4671 CAGAAGGAATCCACCCTTCACTTGGTCTTGCGTCTC 4636 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || || || |||||||| ||||| ||| || ||| Sbjct 4623 CAGATTTTCGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTCGAACCTTCCGAC 4564 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| |||||||| ||||| ||||| ||||| || |||||||| Sbjct 4563 ACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCTGACCAGCAG 4504 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || | ||||||||| | || || | || ||||| || Sbjct 4503 CGTCTGATCTTCGCCGGCAAGCAATTGGAAGATGGACGCACCCTCTCTGACTATAATATC 4444 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| ||||| || || || | || ||| | ||| Sbjct 4443 CAAAAGGAATCCACCCTTCACTTGGTCTTGCGTCTC 4408 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| | || || ||||| ||||| || || || || ||||||| Sbjct 5307 CAGATTTTCGTGAAAACCTTGACGGGTAAAACTATCACTCTTGAAGTTGAGCCCTCAGAC 5248 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| ||||||||||| || || || || ||||| Sbjct 5247 ACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAGCAG 5188 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| ||||| ||||| ||||| || | || || | || || ||| || Sbjct 5187 CGACTGATCTTCGCTGGAAAGCAGCTAGAAGACGGCCGCACACTGTCTGACTACAACATC 5128 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| ||||| || |||| Sbjct 5127 CAGAAGGAATCTACACTCCA-CTTG 5104 Score = 109 bits (120), Expect = 1e-18 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || || || ||||||||||| || || || Sbjct 3027 CAGATCTTTGTCAAGACCTTGACTGGCAAGACTATTACCCTCGAGGTCGAGCCTTCTGAT 2968 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| |||||||||||||| ||||| || |||||||| Sbjct 2967 ACAATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAGCAG 2908 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| ||||| || || || | || || |||| || ||| || Sbjct 2907 CGTTTGATCTTTGCTGGAAAGCAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATC 2848 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || || || |||| Sbjct 2847 CAAAAGGAATCGACCCTTCA-CTTG 2824 >seq4794 Length=169352 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| ||||| || || || ||||| || ||||| || ||| || Sbjct 81371 CAGATTTTTGTCAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAGCCCTCGGAT 81312 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 |||||||| || || ||| ||||| ||||| || || ||||||||||| |||||||| Sbjct 81311 ACCATCGAAAATGTGAAAGCCAAGATCCAGGATAAGGAGGGAATCCCTCCAGACCAGCA 81253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202392824318126