Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq134 109 4e-19 >seq134 Length=761937 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||||| || |||||||| ||||| | |||||||| || || || ||||||||||| Sbjct 24563 AGTGATGTGTGCAATCATATGTGTTAATAAGGAATAGCTGGCTATATTGAATGGCACTCC 24622 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 ||| ||||| ||||| ||||||||| || || || || | |||||| ||||| Sbjct 24623 TAAGCCCATGTCAGCACTTCTTTGATATAGCTGGCAAGATAATTTTCCACTGGCCACATA 24682 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 |||||| | ||| || || || | ||||| || ||||||| |||||| Sbjct 24683 GAATTGAGCCAGACAATGGCATGGTGGTAGAGCCATTAACCCAAGGTCTGAAGGATTCCA 24742 Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTT 101964 |||||||||| ||| || ||||| | |||||| Sbjct 24743 TGCACACATTATCATTCTCCTATCAGCAGGGTT 24775 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 102089 CCTTCATCTCTGTCA-TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATC 102147 ||||| |||| | | |||| ||||||| |||||| || | ||||||||| || || Sbjct 27017 CCTTCTTCTCGATTAGTAAATCCCAAGTT-ATCTAAGAAACTACGAGATCCATTGGCGTC 27075 Query 102148 CCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCA 102207 ||| || || || || ||| || || ||| ||||||||||| || | ||| Sbjct 27076 CCAGATATGGACTCCTTTTGCGGAAAGTGTTTTAGCATCAGTAGATCCAGAAATCATCCA 27135 Query 102208 CAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTC 102267 || || ||||||| ||| ||||| ||| ||||| || ||||| | |||||| ||| Sbjct 27136 CAGCAACTCTTCAATAACGCCTCTGGTAAACACTCTTTTGGTAGTGAGAAGTGGTAATGT 27195 Query 102268 ATT-TTCTAAA 102277 ||| |||| || Sbjct 27196 ATTATTCTGAA 27206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361159310225621