Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq44 228 7e-55 seq158 109 5e-19 seq36 82.4 7e-11 >seq44 Length=1464967 Score = 228 bits (252), Expect = 7e-55 Identities = 355/505 (70%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 105997 gggTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056 |||||||| || || || || || ||||||||||| || || || || || ||||||||| Sbjct 1426893 GGGTTAGCTCCCTTACCTCCAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTC 1426834 Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGTTTCTTTTTTCAACATCGTGC 106116 || || | ||| ||||| || ||| | || || || ||| || ||| | || | Sbjct 1426833 CAGGTCTGTAAAAAGTCCTTGACTGAACCAACGAAGCGGTCTCTCTT---AACTTTGT-C 1426778 Query 106117 ATAAAATAA----AATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAA 106172 || || || || || || | || ||||| || || | |||||||||||| || | Sbjct 1426777 ATCGAAGAAGAAGAAGGGATCAGCCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAG 1426718 Query 106173 ATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTT 106232 | || || || ||| | ||||| || || |||||||| || || ||||| || Sbjct 1426717 GTCAGGTTTGGCCTGTTTCAACATCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATT 1426658 Query 106233 CCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAAC 106292 ||| | || | || || || || ||||| | || ||||| |||||||| |||| || Sbjct 1426657 CCAGGACGATAAGCCCTTCTGTGGCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATAC 1426598 Query 106293 TTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGT 106352 |||||| ||||| || || |||| || | ||||| | || || || || || Sbjct 1426597 TTTGAAGTCTTCCCGACCGCTGCAGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTC 1426538 Query 106353 TTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAGTG 106412 || | |||||| || ||||| |||||||| || || ||||| || ||||| ||||| Sbjct 1426537 CTTCAAACTGTCGTTAATGCCATCACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTG 1426478 Query 106413 TGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTC 106472 | | || || | |||||||||||||||||| || || ||| |||||| ||||| || Sbjct 1426477 GGTCAGGTTGGGAACGGGAACTTTGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTC 1426418 Query 106473 AACAAAGTACGCAGCGACAATTTTA 106497 || ||||||||| |||||| |||| Sbjct 1426417 TACGAAGTACGCACCGACAACTTTA 1426393 >seq158 Length=707457 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 || |||||| |||||| ||||||| | ||||| || ||||| ||| || ||| | Sbjct 607073 AACAATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGC 607132 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 |||| || | | || | ||| || || |||||||||||| | || || Sbjct 607133 TTCAGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGA 607192 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||||| |||| ||||| || ||||| || |||||||| | ||| || | ||||| Sbjct 607193 CCAACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTA 607252 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTG-TTACGATTACGAGGAGG 29188 |||||| ||||| ||||| ||||||||| ||||| ||| | ||| ||||||| Sbjct 607253 CAATATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTA-GAGGAGG 607303 >seq36 Length=1647457 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || |||| |||||||| || || ||| |||||| | Sbjct 937517 ATGCAAATTTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGAACCATCG 937458 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || |||| ||||| ||||| ||||| | || |||||| Sbjct 937457 GACACAATTGAGAATGTTAAAGCTAAAATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 937398 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||||||||||||| || ||||| || || || | ||| || | |||||||| Sbjct 937397 CAGCGACTTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTACAAC 937338 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 |||||||| || || ||||| || Sbjct 937337 ATTCAGAAAGAGTCCACTCTGCA 937315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428227046179505