Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq44 260 1e-64 seq36 116 3e-21 seq4 100 2e-16 >seq44 Length=1464967 Score = 260 bits (288), Expect = 1e-64 Identities = 764/1164 (66%), Gaps = 26/1164 (2%) Strand=Plus/Minus Query 102164 ACGCCCGTCCACCCGCGGCCGTACATGGCGACGCCCACGATGAGTTTGT-GGGCCGCTAC 102222 || || ||||| || || |||||||| || || || |||| || || | |||| || || Sbjct 1427274 ACTCCAGTCCATCCACGACCGTACATAGCAACACCGACGACCAGCTTCTTGGGCTGC-AC 1427216 Query 102223 GCCTTGGCCCGTGAGCAACTTCACGGCGTGGTCGGTGGTGTACAGCTCGTTGGCGTTCCA 102282 || || || || || | | | ||| || ||||| ||| |||| ||||| Sbjct 1427215 TCCCTGAGCCAAAAGATACCTAATACCAAAGTCAGTAGTGTAAGTCTCCTTGGGTTTCCA 1427156 Query 102283 ACTGGGCGCGTACAGCGTGGTCTGGTAGCCCAAATCCGTGT---TGGACCACGCGCCCTT 102339 || ||||| | || |||||||| ||| | | |||| ||||||| || ||||| Sbjct 1427155 CTCAGGAGCGTATAACGAGGTCTGGTGGCCAAGA---GTGTCATTGGACCAGGCTCCCTT 1427099 Query 102340 AAAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTGAGCCGCGTCGTACTTCAC 102399 || ||||| ||||| | ||| || | || | | | | || || | | ||| || || Sbjct 1427098 GAAGTCGTAGCTCATCACGAAAATATGGTCCATGTAGTTCTGGGCTTCCTTGTAGTTGAC 1427039 Query 102400 CACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAGCTCGTACGTCTTGTTCGT 102459 || ||| ||||| | || | ||| || || ||||||||||| |||| | || Sbjct 1427038 AACCTGAATCTTGTCCCACCCAGCACTGATGGCAGAAGTCAGCTCGTATTTCTT-TCCGG 1426980 Query 102460 TTGCAGCTGC-AGTTCGTCCAGCATGGCGCGCAACTCTTTCAGCAAAACAAGGTACGTGT 102518 | |||| | | ||||||| |||| | | ||| |||| | | ||| | | Sbjct 1426979 TCTCAGCGGATAACTCGTCCAACATGTGTCTAAGCTCCTTCATGAGTGTCACGTATATTT 1426920 Query 102519 CGGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCC 102578 | | || || || || | ||||| || ||||| || || || ||||||| Sbjct 1426919 CACCATCTTTAGGACCA---CCAAGGTCAGGGTTAGCTCCCTTACCTCCAGGGAACTCCC 1426863 Query 102579 AATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAAACTCTTTAACGGATTCGA 102638 |||| || || || || ||||| || ||||| ||| ||||| || || || || | | Sbjct 1426862 AATCAATATCAACGCCATCGAAGAATTTCCAGGTCTGTAAAAAGTCCTTGACTGAACCAA 1426803 Query 102639 CAAACACGCGCCGCTTGTCCGCGTCGTGCATGAAATAGAACGGGTCGGACAGCGTCCAGC 102698 | || | | ||| | ||| | | ||| |||| || || | ||| ||||| | Sbjct 1426802 CGAAGCGGTCTCTCTTAACTTTGTCATCGAAGAAGAAGAAGGGATCAGCCAGGGTCCAAC 1426743 Query 102699 CGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCAGCTTGGCCGCCATCAACTGGC 102758 | || | || || || || |||| | || || ||| | || | ||||| || | Sbjct 1426742 CACCGACTGAAGGAAGAATCTTCAGGTCAGGTTTGGCCTGTTTCAACATCATCAGTTGAC 1426683 Query 102759 CAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGCCCTTTTGCGGCTTTTGTATGG 102818 | || ||||| ||||| ||||| ||||| | |||| |||||| || |||||||| | | Sbjct 1426682 CGAAATTGCCCTTGTAAGGCTCATTCCAGGACGATAAGCCCTTCTGTGGCTTTTGCAAAG 1426623 Query 102819 CGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGCGGCCTTTGCACGAGCGCTGCA 102878 | ||||| || |||||||| | || || |||||| | || || |||| ||||| |||| Sbjct 1426622 CAGCCCAAGGATCGTGGATGGATACTTTGAAGTCTTCCCGACCGCTGCAGGAGCGTTGCA 1426563 Query 102879 GCGCTTCAAAACTGCCGGGAATGGTCTTGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAA 102938 | |||| ||||| || ||| ||| | |||||| | || || |||||||||| Sbjct 1426562 GTGCTTGGAAACTACCCTCAATTTCCTTCAAACTGTCGTTAATGCCATCACCGCCGCAAA 1426503 Query 102939 TCGGGATGAAGCCGTACAGCAGATGGGACAGGTTGGGCAGCGGCACTTTGTCCACCGGAA 102998 |||||||||||||||||| | |||| ||||||||| | || |||||||| || || | Sbjct 1426502 TCGGGATGAAGCCGTACAATAAGTGGGTCAGGTTGGGAACGGGAACTTTGTCTACGGGGA 1426443 Query 102999 AGC--CGCGGCCGTACACGCCCCACTCTACGAAATACGCGGCCACGGTCTTGTTGTGGGG 103056 | ||||| |||||||||||| |||||||| ||||| | || ||| | || Sbjct 1426442 ACTTTCGCGG--GTACACGCCCCATTCTACGAAGTACGCACCGAC-AACTTTACCAGAGG 1426386 Query 103057 GCGGC----CGGGCTTGTTGTTTTCGCCCCAAGCGTACTCTAGCGGCGACAAGTGCCCGC 103112 | || ||||| || || || || | | | ||||| |||| ||||| | | Sbjct 1426385 TCTGCTTGAATGGCTTATTCTTCTCTCCGATGGTGAATTCTAGAGGCGGTAAGTGGCTAC 1426326 Query 103113 CGTCCGTGTCGGCCACCCTGACGGTCACCGGCTCGCTCACGGAGAAGCCGTCGTCGTCGC 103172 |||| ||||| ||||| || ||||| ||||||| | | | || ||| || || Sbjct 1426325 CGTCGGTGTCAGCCACAACGATCTCCACCGACTCGCTCGAGCTGCATCCATCGGAGTTGC 1426266 Query 103173 ACAGTTTGACGCGCATGTTAAACTGTCCGCTCTTGGACACGTCGATCGTGGCTCGCTTG- 103231 ||| | || |||| | | | |||||| ||| ||| | || ||| | ||| Sbjct 1426265 ACAACTCAACTTGCATCTGATAGCGTCCGCCCTTCTTCACTTTGAAGTTGG--CCATTGA 1426208 Query 103232 -GCGGCGGCGGCGCCCTTCCACACTTGATTTTCGTTAAACAACACGTACGCCATGTCGCC 103290 ||| | | || || ||||| |||| | |||| | ||| || | | | || | Sbjct 1426207 AGCGCTGCCAGCACCTTTCCAGACTTCTTCGCCGTTGAGCAAGACTCTGGACTTATCAGC 1426148 Query 103291 CACGCCGCCGTTCCACACGTTCCA 103314 | | ||||| ||||||||||||| Sbjct 1426147 CGGGTCGCCGGTCCACACGTTCCA 1426124 >seq36 Length=1647457 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| |||| ||||| |||||||||||||| || || | Sbjct 455600 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455541 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||||||||| ||| | || | || ||||||||| ||| Sbjct 455540 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGA 455481 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| ||||||| || || | ||| ||| || ||||| Sbjct 455480 ATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACC 455421 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||| || || || | ||||||||||| || ||||| Sbjct 455420 TCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 ||||| || || || | ||||||| || | ||| |||||||| || ||||| ||||| Sbjct 456284 TTTCCACCGCGAAGACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 456225 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | ||||| || | ||||| ||||||||||| || | || | || ||||||||| | Sbjct 456224 GAGAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGG 456165 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||| ||||| ||||||| || || | | | || ||| ||||| Sbjct 456164 GGAATGCCTTCTTTGTCTTGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCA 456105 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||||| || ||||| || | || |||||||| || ||||| Sbjct 456104 ACTTCAAGAGTAATAGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| |||| ||||| |||||||||||||| || || | Sbjct 455828 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455769 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||||||||| || | || | || ||||||||| ||| Sbjct 455768 AGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455709 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | ||| ||| || ||| | Sbjct 455708 ATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACT 455649 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| || || || || | ||||| || || || ||||| Sbjct 455648 TCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 102 bits (112), Expect = 7e-17 Identities = 159/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| || | ||| ||||| || || ||||| ||||| | Sbjct 456053 CCACCACGCAGACGGAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAA 455994 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||||||||| || | || | || ||||||||| ||| Sbjct 455993 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455934 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| ||||||| || || | |||| ||| || ||| | Sbjct 455933 ATGCCTTCTTTGTCTTGGATCTTTGCCTTTACAT---TCTCAGTGTCAGATGGTTCCACT 455877 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| || || || || | ||||| || || || ||||| Sbjct 455876 TCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||||||||| || |||||||| || || ||||| | || || || ||||| Sbjct 935551 AGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCGTCC 935610 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| | ||||||| |||||| ||| || | |||||||||||| Sbjct 935611 TCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 935670 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || || || || | | | || ||| |||||| ||| | || || || Sbjct 935671 TGAATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGATCGTT 935730 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | ||| || || ||||||||||| Sbjct 935731 TTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | ||| |||||||| || ||||| ||||| | Sbjct 455372 CCACCACGAAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAA 455313 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||||||||| || | || | | ||| ||||| ||| Sbjct 455312 AGGGTACGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGA 455253 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| |||||| || || | | | ||| || ||||| Sbjct 455252 ATGCCTTCTTTGTCTTGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACC 455193 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || || ||||| || | || |||||||| || ||||| Sbjct 455192 TCAAGGGTGATTGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 >seq4 Length=2913607 Score = 100 bits (110), Expect = 2e-16 Identities = 104/134 (78%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870 |||||| || || |||||||| ||| | | |||||||| | ||||| ||| || Sbjct 2347989 GTTGCCGAGATCACCGACGTGACGCACGGACGCGTCGGGGCCACCGTG-CTCCTGCTTCA 2347931 Query 23871 G-GGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCA 23929 | |||||||||||| |||| || || ||||||||||| || |||| ||||| || |||| Sbjct 2347930 GCGGGTTAAAGTGCGCGCCGGCCGATGTGCAGCCGTTTGTGTTGTCACCGAACTCATGCA 2347871 Query 23930 CGTGAAAACCGTGC 23943 |||| ||||||||| Sbjct 2347870 CGTGGAAACCGTGC 2347857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422151791906636