Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq44 282 3e-71 seq158 109 5e-19 >seq44 Length=1464967 Score = 282 bits (312), Expect = 3e-71 Identities = 363/501 (72%), Gaps = 0/501 (0%) Strand=Plus/Minus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 |||||||| || || || || || || |||||||| | || || ||||| || |||||| Sbjct 1426893 GGGTTAGCTCCCTTACCTCCAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTC 1426834 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGTTTCTTTTTTCAACGTCGTGC 97883 || || ||||| ||||| || || | || || || ||| || | ||| | Sbjct 1426833 CAGGTCTGTAAAAAGTCCTTGACTGAACCAACGAAGCGGTCTCTCTTAACTTTGTCATCG 1426774 Query 97884 ATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATGT 97943 | ||| |||| || || | ||| ||||| || || | |||||||||||| || || | Sbjct 1426773 AAGAAGAAGAAGGGATCAGCCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAGGTCA 1426714 Query 97944 GGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCAA 98003 || || || |||| | ||||| ||| || |||||||| ||||| || || ||||| Sbjct 1426713 GGTTTGGCCTGTTTCAACATCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATTCCAG 1426654 Query 98004 GCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTTG 98063 | || | |||||| || || ||||| | || ||||| ||||||||||||| |||||| Sbjct 1426653 GACGATAAGCCCTTCTGTGGCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATACTTTG 1426594 Query 98064 AAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTTG 98123 || ||||| || || ||||| || |||||||| |||| ||||| || ||| || Sbjct 1426593 AAGTCTTCCCGACCGCTGCAGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTCCTTC 1426534 Query 98124 AGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGAT 98183 | |||||| || ||||| || ||||| || || ||||| |||||||| ||||| | Sbjct 1426533 AAACTGTCGTTAATGCCATCACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTGGGTC 1426474 Query 98184 AAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGACA 98243 | || || | |||||||||||||||||| || | ||| |||||| ||||| || || Sbjct 1426473 AGGTTGGGAACGGGAACTTTGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTCTACG 1426414 Query 98244 AAGTACGCAGCGACAATTTTA 98264 ||||||||| |||||| |||| Sbjct 1426413 AAGTACGCACCGACAACTTTA 1426393 >seq158 Length=707457 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 || |||||| |||||| ||||||| | ||||| || ||||| ||| || ||| | Sbjct 607073 AACAATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGC 607132 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 |||| || | | || | ||| || || |||||||||||| | || || Sbjct 607133 TTCAGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGA 607192 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||||| |||| ||||| || ||||| || ||||||||| | ||| || | ||||| Sbjct 607193 CCAACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTA 607252 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTG-TTACGATTACGAGGAGG 25261 |||||| || || ||||| ||||||||| ||||| ||| | ||| ||||||| Sbjct 607253 CAATATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTA-GAGGAGG 607303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410692307543594