Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq36 100 4e-16 seq158 84.2 3e-11 >seq36 Length=1647457 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||| || | || || ||||| || ||| | || |||| | Sbjct 454918 ATGCAGATTTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCCGTCA 454977 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | ||| |||||||||||||| |||||||| || || ||||| Sbjct 454978 GACACTATTGAGAACGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGATCAG 455037 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| ||||| |||||||| || | || || | ||||||||| Sbjct 455038 CAGCGACTGATCTTTGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTATAAC 455097 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || |||||| | || |||| | ||| | || |||||||| Sbjct 455098 ATCCAGAAGGAGTCAACTCTTCACCTGGTGCTCCGTCTGCGCGGTGGTAT 455147 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | ||||| || || || ||||| || || | || | || | | Sbjct 935762 ATGCAAATATTCGTTAAGACGCTGACCGGTAAAACGATCACACTTGAAGTGGAGCCTTCT 935703 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | || |||||||| || || ||||| || || || ||||| Sbjct 935702 GACACAATTGAGAATGTTAAGGCCAAAATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 935643 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| ||||| || || || | ||||| | || || | || || ||| Sbjct 935642 CAGCGACTTATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAAT 935583 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 || ||||| ||||| ||||||||||| || |||| Sbjct 935582 ATCCAAAAGGAATCTACTTTGCATTTAGTACTACG 935548 >seq158 Length=707457 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 |||||||| ||||| | || || ||||| || || || || || | ||| | || || Sbjct 607074 ACAATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGCT 607133 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || || || ||| | || || || ||||||||||||||||| || || || Sbjct 607134 TCAGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGAC 607193 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 ||||| | || || || || || || || || || ||| | || || | ||||| Sbjct 607194 CAACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTAC 607253 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGT-TTTACGTTTACGAGGTGGTA 124767 ||||| || |||||||| ||| | || ||||| ||| | ||| |||| |||| Sbjct 607254 AATATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTA-GAGGAGGTA 607305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755258910972800