Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq44 215 4e-51 seq36 134 1e-26 seq4 102 7e-17 >seq44 Length=1464967 Score = 215 bits (238), Expect = 4e-51 Identities = 789/1212 (65%), Gaps = 39/1212 (3%) Strand=Plus/Plus Query 21568 TAAAATCGTGGCGGCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGA 21627 |||| | || | || ||||| || |||||||| ||||||| | || |||||||||| || Sbjct 1426393 TAAAGTTGTCGGTGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGA 1426452 Query 21628 CAAGGTGCCGGCGCCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGG 21687 ||| || || | || || || | || || | ||||||||| | ||||| ||||| || Sbjct 1426453 CAAAGTTCCCGTTCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGG 1426512 Query 21688 CGACGGCATCAACGACGCGCTAAA---AACGGTGCCTGGCAGTTTTGAGGCATTGCAACG 21744 || ||||| |||||| | || || | | || ||||| | ||| ||||||| Sbjct 1426513 TGATGGCATTAACGACAGTTTGAAGGAAATTGAG---GGTAGTTTCCAAGCACTGCAACG 1426569 Query 21745 TTCGTGTGCGGGTCGGGCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACA 21804 || || ||||||| || ||||| || | || |||||||| ||||| || | || Sbjct 1426570 CTCCTGCAGCGGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCA 1426629 Query 21805 AAAGCCCCAAAAGGGCGTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACT 21864 |||||| || |||||| | ||||| ||||| || || ||||| ||||| || |||||||| Sbjct 1426630 AAAGCCACAGAAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACT 1426689 Query 21865 GATGGCAATGAAGAGGGCCAATCCTCACATTAA-AGTGTTCGCATCGATCGGCGGATGGA 21923 |||| |||| |||||| ||| || | || | | ||| | || |||| || |||| Sbjct 1426690 GATGATGTTGAAACAGGCCAAACCTGACCTGAAGATTCTTC-CTTCAGTCGGTGGTTGGA 1426748 Query 21924 CTCTGTCCGATCCATTTTATCATATGC-ACGACGCCG--ACGTCAGACGGGTGTTTATCG 21980 | ||| | ||||| || | || | | | | ||| | | | |||| | || | | Sbjct 1426749 CCCTGGCTGATCCCTTCT-TCTTCTTCGATGACAAAGTTAAGAGAGACCG--CTTCGTTG 1426805 Query 21981 ATTCAGTTGAAGAATTTCTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGG 22040 |||||| | || ||| | | || ||||| |||| || ||||| | || ||||||| Sbjct 1426806 GTTCAGTCAAGGACTTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGG 1426865 Query 22041 AGTTTCCCGGCGGCAAGGGAGCCAACCCCGACGTGGGCGACGCGGAACGCGACCGCGAAA 22100 |||| || || || |||||||| ||||| ||| | || | | || || | |||| Sbjct 1426866 AGTTCCCTGGAGGTAAGGGAGCTAACCCTGACCTTGGTGGTCCTAAA---GATGGTGAAA 1426922 Query 22101 CGTACACGCTCCTCCTGCAAGAGCTGCGTTTACGT-TTAAACGCGCTCGGCGCCCGCACC 22159 ||| | ||| || | ||||| | || | || ||| | | ||| ||| Sbjct 1426923 TATACGTGACACTCATGAAGGAGCTTAG-ACACATGTTGGACGAGTTATCCGCTGAGACC 1426981 Query 22160 -AACCGATATTACGCCCTGACTTCGGCAGTGAGCGCGGGCAACGACAAGATAGCCGTCGT 22218 | || | |||| |||||||| || | || || || |||||||| || || Sbjct 1426982 GGAAAGA-AATACGAGCTGACTTCTGCCATCAGTGCTGGGTGGGACAAGATTCAGGTTGT 1427040 Query 22219 CAACTATACCGAAGCGCAAAAGTATTTGGACACAATCTTTTTGATGACATACGATTTCAA 22278 |||||| | ||||| || || || ||||| || || |||||| ||||| ||||| Sbjct 1427041 CAACTACAAGGAAGCCCAGAACTACATGGACCATATTTTCGTGATGAGCTACGACTTCAA 1427100 Query 22279 GGGAGCGTGGAGCA---ACACTGAATTGGGACATCAGACCGCGCTTTTTGCGCCCACTTG 22335 |||||| ||| || ||||| | || || |||||| || | | || || || Sbjct 1427101 GGGAGCCTGGTCCAATGACACT---CTTGGCCACCAGACCTCGTTATACGCTCCTGAGTG 1427157 Query 22336 GCGTCCCGACGAACCATACTGCGCCGACCGCGCCGTA-GAGCTATTGCTCGGC-CAGCAC 22393 | ||| | || | ||| | ||| | ||| || ||| | ||| ||| Sbjct 1427158 GAAACCCAAGGAGACTTACACTACTGACTTTG--GTATTAGGTATCTTTTGGCTCAGGGA 1427215 Query 22394 GTGCCGGCCGGAAAGATTGCGCTCGGCGTCGCCATGTACGGCCGCGGATGGAGCGGCGT- 22452 |||| | || ||| | | |||| || || |||||||| || ||||||| || || Sbjct 1427216 GTGCAGCCCAAGAAGCTGGTCGTCGGTGTTGCTATGTACGGTCGTGGATGGACTGGAGTC 1427275 Query 22453 CGTGAGCGACGACACCGATAATCCGTTCCTCGGCGTCGCCGATGGCCCCGTGCCCGGCAC 22512 | ||| | || | ||||| || ||| || || || |||||||| || || || Sbjct 1427276 CATGA-CTACAAGGACGATATCCCCTTCACAGGAGTAGCTGATGGCCCTGTTAAAGGTAC 1427334 Query 22513 TTGGGAAGCGGGCGTAGTGGACTATCGTCAGATCGTCCA-CAACATGTCA-----CAGTA 22566 |||| | | || || || ||||| | |||| | | | | || || |||| Sbjct 1427335 TTGGCAGGACGGAGTGGTCGACTACAGGGAGATTGCCAATGGAATTGCCAGTGGTCAGTG 1427394 Query 22567 CGATTATGTATACGACGAGGTTGTCAAAGGGGCGTACGTTTACAATCGTGAAAACGGCAA 22626 ||| |||||| | || | | ||| | ||||| | ||||| | | || | Sbjct 1427395 GACCTATCACTACGACAAAGTAGCCCAAGCTCCATACGTCTTCAATCCTTCCACAGGAGA 1427454 Query 22627 TCTTATCACATACGACGACCCAAAGTCTGTCGCCGATAAGACTAAGTACGTGCTCGATCA 22686 ||| | || ||||| || | | ||| ||| ||| || || || ||| || | Sbjct 1427455 CCTTGTTACCTACGATGATTCGAGGTCAGTCATCGAGAAAGGCAAATATGTGAGGAATAA 1427514 Query 22687 CGAGTTGGCCGGCGTGTTTGCGTGGGAAATTGACGCCGATAACGGTGATTTACTCAACGC 22746 | | | | ||| | || || |||||||| ||||| || ||||||||| | || ||||| Sbjct 1427515 CAAACTAGGCGGTCTTTTCGCTTGGGAAATAGACGCTGACAACGGTGATATTCTTAACGC 1427574 Query 22747 CATCAACAAGGG 22758 || |||| ||| Sbjct 1427575 AATGAACATGGG 1427586 >seq36 Length=1647457 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | ||| | || || || | || |||||||| |||||||||||||| | Sbjct 937291 CCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGAC 937350 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||||| ||||||||||| || |||| || ||||||||||| ||||| Sbjct 937351 AGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGA 937410 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 ||||| ||||| || ||||| |||||| | || | ||||||| || | || || Sbjct 937411 ATGCCTTCCTTATCCTGGATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGT-TCCAC 937469 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | |||||||| ||||| || || |||||||| ||||| Sbjct 937470 TTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || ||||||||||||||||| | ||||| |||||| Sbjct 455582 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCA 455523 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || || |||| | |||||||| || || || ||||| || |||||| Sbjct 455522 AGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGG 455463 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| ||||| | |||| ||||| | ||| ||||| | ||| | ||||| Sbjct 455462 ATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTTA 455403 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| |||||||| Sbjct 455402 CCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||||||| | ||| || || || ||||||||||| || Sbjct 937517 TACCACCGCGGAGGCGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTG 937576 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||||| ||| || | ||| ||||| || | ||||||||||||||||| |||| Sbjct 937577 ATAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAG 937636 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| || |||||| ||||| || || | ||| | ||||| | ||| | Sbjct 937637 GAATGCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAA 937696 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || | ||| ||||| || |||||||| Sbjct 937697 CTTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCAT 937745 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | |||||||| || || |||||||| ||| | ||||| |||||| Sbjct 456264 CACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 456205 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||||||| |||||| |||| | |||||||| || || || ||||| || |||||| Sbjct 456204 GAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTG 456145 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || ||| || || | || | |||||| | ||| || || | || | ||||| Sbjct 456144 GATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTT 456085 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || ||||| |||||||| Sbjct 456084 GCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || ||||||||||||||||| | ||||| ||||||| Sbjct 455810 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCG 455751 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| |||| | |||||||| || || || ||||||||||||||| Sbjct 455750 AGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 455691 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||| | || | || || || | || | ||||| Sbjct 455690 ATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGT-TCCACTTCCAGTGTAATAGTTTT 455632 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||||||| || || |||||||| Sbjct 455631 TCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || ||||| || ||||| ||| | ||| || ||||||||||| || || Sbjct 935566 GTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCG 935625 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 935626 GCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAATTTTGGCCTTA 935685 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | ||| || || | || | |||||| |||||||| || Sbjct 935686 ACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGATCGTTTTACCGGTCAGCGTC 935745 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 935746 TTAACGAATATTTGCAT 935762 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||| ||| | || ||||| || || ||||| ||||| Sbjct 455146 TACCACCGCGCAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTG 455087 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| || || | || |||||||| |||| || ||||||||||| || | Sbjct 455086 AGAGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGG 455027 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| |||||| ||| || | || | ||||| | ||| | Sbjct 455026 GAATACCTTCCTTATCTTGAATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAA 454967 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT 118745 | |||| || | ||||| || |||| |||||||| ||||||||||| ||||| Sbjct 454966 CTTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGCAT--CTTAT 454913 >seq4 Length=2913607 Score = 102 bits (112), Expect = 7e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 47169 CGCTTCAATGTTACCCAGATCGCCTACGTGACGCTCGGCGGCGTTGGGAGCGCCGTGATT 47228 ||| |||||||| || ||||| || ||||||||| ||| |||| ||| | ||||| | Sbjct 2347998 CGCCTCAATGTTGCCGAGATCACCGACGTGACGCACGGACGCGTCGGGGCCACCGTGCTC 2347939 Query 47229 GCGGCCCAACGGATTATAGTGTTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAA 47288 | || ||| ||| |||| |||||||||| ||||||||||| | |||| ||||| Sbjct 2347938 CTGCTTCAGCGGGTTAAAGTGCGCGCCGGCCGATGTGCAGCCGTTTGTGTTGTCACCGAA 2347879 Query 47289 TTCGTGCACGTGAAATCCGTG 47309 || |||||||| || ||||| Sbjct 2347878 CTCATGCACGTGGAAACCGTG 2347858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433720048594732