Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq36 98.7 1e-15 seq158 89.7 8e-13 >seq36 Length=1647457 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/187 (69%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || ||||||||||| || || | || || |||||||| ||||||||||| |||| || Sbjct 455099 ATGTTATAATCTGAGAGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGC 455040 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215 |||||||| || ||||| ||||| |||||||| ||| Sbjct 455039 TGCTGATCTGGGGGAATACCTTCCTTATCTTGAATTTTAGCTTTGACGTTCTCAATAGTG 454980 Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275 ||||| || ||||| || ||||| |||||||| || || ||||| | ||| || ||| Sbjct 454979 TCTGACGGCTCAACTTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGC 454920 Query 146276 ATTTTAT 146282 || |||| Sbjct 454919 ATCTTAT 454913 Score = 93.3 bits (102), Expect = 6e-14 Identities = 152/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || | ||||| || ||| ||||| ||||||||||| || ||||| || || || Sbjct 935536 CCGCCGCGAAGTCGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAG 935595 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | || || || | || || || ||||| || | || ||||||||||||||| Sbjct 935596 AGAGTACGGCCGTCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGA 935655 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || || || || || ||| || ||| Sbjct 935656 ATGCCTTCCTTGTCCTGAATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACT 935715 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || |||||||| |||||||| || | || |||| |||||||||||| Sbjct 935716 TCAAGTGTGATCGTTTTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 >seq158 Length=707457 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||||||| || | ||||| || | ||| |||||||| ||||| ||||| || Sbjct 607303 CCTCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAC 607244 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | || ||| || || || || || || || || | || || || |||||||| Sbjct 607243 AGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAGGG 607184 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 607183 ATACCTTCTTTATCTTG 607167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743332423256320