Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq616 544 8e-150 >seq616 Length=113079 Score = 544 bits (602), Expect = 8e-150 Identities = 1197/1777 (67%), Gaps = 28/1777 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || || |||| ||||| |||| ||| | ||| || | | |||||||||||| ||| Sbjct 35136 TCTACAGTAAATTGTATAGCGTTTGCTGCAGGTTTAGTACGTAGATAATACATTCCTGTT 35195 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | |||| | |||| |||||||| ||| || || || | || |||| | Sbjct 35196 TTCAAACCCATTTTCCAGGAATAAAAATGAATAGAAGTTAGCTTCCCATAATTAGGTTCT 35255 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | | || || | | |||||| |||||||||||||| || || ||||| ||||||||| Sbjct 35256 GCAACATGAATGTTGAATGATTGGCTTTGATCTATAAATGCTCCCCTGTCTGCTGCCATT 35315 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | | | || ||| || |||||||| ||||| || | | | | || || | | Sbjct 35316 TGAATAGTGGTCTTAACAGAAATTTCCCAAACAGTTTTGTACAAATCTCTAAT-TTCTTT 35374 Query 37030 GGTAAAT--CTAAATG--TTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTC 37085 | || | || |||| ||| || || ||||| | | || || || ||||| Sbjct 35375 AGGAATTACCTCAATGCTTTGTATGGAGCCATTGTTGTGGATGATAAGGTTTTTCATGTC 35434 Query 37086 ATTATTCCACATATTTCTACTTATT--AGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 | || ||||| ||| ||| | || || | ||||| || |||| ||||| ||| Sbjct 35435 TTCATCCCACAA--TTCAGCTTCTGTGAGATCACGTAATAGATGGTGATTAACAACTTGA 35492 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGG-TTCAATGGACTC 37202 || || || |||| || | ||| |||||||||| || ||||| ||||| ||||| Sbjct 35493 AATTCACCTGATAGAACGCGTCTCTGATATATATTGGAGGT-TATGGGTTCAAATGACTC 35551 Query 37203 ATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATT 37262 |||||| | | ||||||| ||||||||| || ||||| || |||| || ||| || Sbjct 35552 ATTATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTT 35611 Query 37263 TCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG 37322 ||| | |||||| | |||| | | ||| | || |||| ||||| || | ||||| Sbjct 35612 TCTAAGGCCATGTTTTGCAATTTTTTCTTTCAAGGCAGTCCAGTCCCACAAGTTAGTTGG 35671 Query 37323 GTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGT 37382 |||| ||||||||| ||||||| ||| |||| ||||| ||| | | ||| || Sbjct 35672 AGTCTTATTCCACATATCGTATTGTAAAATTCCTTGGCTCGCCGGACTGCCTTCATAAGT 35731 Query 37383 CTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATAT 37442 ||||| ||| || ||| |||| || || || | ||| ||||| | ||||| || Sbjct 35732 TTCATAGACTCCATATTTTTCGGCTAATTGACAGCTTGCTTCAAGTGCTCCGTAATAAAT 35791 Query 37443 TGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAA 37502 |||||| || |||||| ||||| || | || ||| |||||| ||| | | || Sbjct 35792 TGTTTCAAATATTTGTTGATTTAGCTTTATGGCCGGTTCACTATCGTATGGAATACGCAT 35851 Query 37503 TAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATT 37562 | ||||| || || || || || || || ||||| || ||||| ||| || |||| Sbjct 35852 AAGAATAAATGTGTCTGCTAATCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATT 35911 Query 37563 AGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTT 37622 ||| | | ||| ||||| |||||||| | || || |||||||| ||||| | Sbjct 35912 GGATGTTTTAGCTTCAGGAACTGGGTAATAATTAACTTCAATAATTTTATTAAGATTCTG 35971 Query 37623 AACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTA---TTATTAAC 37679 || ||||| |||| | | | | || || || | || ||| | ||| || Sbjct 35972 TGTTATGATTTTTGTAACTTCTTTTAGTTTATCAAAATTGTATGTTTTATCTTCATTGAC 36031 Query 37680 AAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAA 37739 ||| | | | | |||||| | | ||| || |||||||| ||||| | | | | Sbjct 36032 AAACATGTTAAGTGCAATAGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTA 36091 Query 37740 TTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGA 37799 | | || || ||||| | ||| || | |||| ||||| | ||| |||| || Sbjct 36092 CTCCACTATTTCAGTACACAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACT 36151 Query 37800 TTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTC 37859 ||| || || || |||||||| | ||||| || ||||| ||||| ||| || || Sbjct 36152 TTTGCGGTTGCACGAGTCTTTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTC 36211 Query 37860 GATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTT---TAAt-ttttttCTTTG 37915 ||||||| |||||| | | |||||||| | |||| ||| ||||||| Sbjct 36212 TATAATAGCTTTCCACAGAGCCTGAGCTTTAAC--TTGCTTAACAAATCGATTTTCTT-- 36267 Query 37916 TTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGAC 37975 |||| |||| | |||| | | ||| || | ||||| ||| ||| ||||||| Sbjct 36268 TTTCATATTTCTTGTATAGTGCCTCAAATTCTTCTCCCCAACAATCTGCTAAGCCTGGAC 36327 Query 37976 ATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAAT 38035 | || |||||||| ||| ||| | ||||| | ||||| | || ||||||||||| Sbjct 36328 AGTCATGAGGACACATAAGACTCCAATTTTCATTACTCTCTACTCTTTTCATAAATAAAT 36387 Query 38036 CAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCT 38095 |||||| |||||| ||| ||| | ||| | | || |||||| || || ||| | Sbjct 36388 CAGGTATCCATAAAGCATAAAAGAGTTCTCTAGCTCGTACTTCTTCTTTGCCAGTATT-T 36446 Query 38096 TTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATT 38154 || || || | || || ||||| ||||| || ||||||||||| | || | | | Sbjct 36447 TTTTTCAGATCTAAGAATTCGAAAATATCTGCATGCCATGGTTCCAAGTATACTGCAAAA 36506 Query 38155 GCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTT 38214 ||||| || | ||||| || || |||| | |||||| | || || ||||| | || Sbjct 36507 GCTCCAGGACGTTTATTGCCCCCTTGATCTACATATCTGGCAGTATTGTTATACACTCGC 36566 Query 38215 AACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCT 38274 |||||||| || | ||||| || || ||| | || | |||||||| || || ||| Sbjct 36567 AACATAGGGACAAGGCCATTGGAGACACCATTTGTTCCAGCAATATAAGTGCCTTTGGCT 36626 Query 38275 CGTAT--ATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATT 38332 | ||| | | || ||| ||| || || || ||| ||| ||||||||||| |||| Sbjct 36627 CTTATGCAGTGAACATGGAC--TCCAATACCTCCAGCAGATTTAGATATTAAAGCACATT 36684 Query 38333 GTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAAC 38392 | ||||| || ||| |||| ||||| ||||| |||||||| |||| | || || || Sbjct 36685 GCTTTAATGTGTCATATATGCCTTCAATACTATCATCCTTCATTGCAACTAAGAAGCATG 36744 Query 38393 TAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACC 38452 ||| | || || ||| ||| | || ||||||||| || ||||| | || Sbjct 36745 AAGATAGCTGTGGTCGTGGCGTTGCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAAT 36804 Query 38453 ATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATAC 38512 |||||||||||| |||||||||| || ||| || |||| ||||| | ||||| || | Sbjct 36805 ATTTTTCCGACAGTAAATTATATGTATCAATTGCAGCATCAATATCTTCACCGTGTATTC 36864 Query 38513 CTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 ||| ||| || | ||| ||||| |||||||| | ||| Sbjct 36865 CTATAGACACACGCATCAGCATGTGTTGTGGCCGTTC 36901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468402567736240