Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq616 540 1e-148 seq200 95.1 2e-14 >seq616 Length=113079 Score = 540 bits (598), Expect = 1e-148 Identities = 1216/1806 (67%), Gaps = 52/1806 (3%) Strand=Plus/Plus Query 64817 TTTTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCG---GATGCGGGTTTCGTACG 64873 ||| | |||| ||||| | || ||||| || |||| | ||| ||||| ||||| Sbjct 35120 TTTAACTTTAGATTTGTCTACAGTAAATTGTAT---AGCGTTTGCTGCAGGTTTAGTACG 35176 Query 64874 TAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAG 64933 |||||| |||||||| ||||| | ||| | |||| |||||||| ||| ||||| Sbjct 35177 TAGATAATACATTCCTGTTTTCAAACCCATTTTCCAGGAATAAAAATGAATAGAAGTTAG 35236 Query 64934 TTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGC 64993 || |||| | || ||||| | ||| || || | ||||| |||||||| || || || Sbjct 35237 CTTCCCATAATTAGGTTCTGCAACATGAATGTTGAATGATTGGCTTTGATCTATAAATGC 35296 Query 64994 TCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 65053 |||||||||||| ||||||| || | ||||| | ||||||||||| |||||| || Sbjct 35297 TCCCCTGTCTGCTGCCATTTGAATAGTGGTCTTAACAGAAATTTCCCAAACAGTTTTGTA 35356 Query 65054 -AACTCGCTTAATATCTTCTGGAAGGTT---TGTATTCT--GAATGGATCCACCATCTGC 65107 || || || ||| |||| |||| || | || || | ||||| ||| | Sbjct 35357 CAAATCTCT-AATTTCTTTAGGAA--TTACCTCAATGCTTTGTATGGAGCCATTGTTGTG 35413 Query 65108 CATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAG 65167 || || || || || || |||| ||| |||| || || | | | | | || Sbjct 35414 GATGATAAGGTTTTTCATGTCTTCATCCCACAATTCAGCTTCTGTGAGATCACGTAATAG 35473 Query 65168 ATGCGGATTAACTACTTGAAATTCTCCAGACAATAC---TCTCCGAGTGTAAATATTACT 65224 ||| ||||||| ||||||||||| || || | || |||| || || ||||| Sbjct 35474 ATGGTGATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCTGA---TATATATTGGA 35530 Query 65225 GGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 65284 ||| ||||| | ||||||||||| || | ||||||||| || ||||| || ||||| Sbjct 35531 GGTTATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCAT 35590 Query 65285 AGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGT 65342 || || || || | |||||||| || ||||| || ||||| ||||| | | Sbjct 35591 GGGAGCTACTAAAAGTGAGTTTCTAAGGCC--ATGTTTTGCAATTTTTTCTTTCAAGGCA 35648 Query 65343 TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTA 65402 ||| | ||| | | | || ||||| ||| || | Sbjct 35649 GTCCAGTCCCACAAGTTAGTTGGAGTCTTATTCCACATATCGTATTGTAAAATTCCTTGG 35708 Query 65403 CTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACT 65461 || || | || ||| |||| || || || ||| | || || |||| || ||| || Sbjct 35709 CTCGCCGGACTG-CCTTCATAAGTTTCATAGACTCCATATTTTTCGGCTAATTGACAGCT 35767 Query 65462 CGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCT-- 65519 || || | ||| ||||||||||| ||||| || || | | |||||| | | || Sbjct 35768 TGCTTCAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGATTTAGCTTTATGGCCGG 35827 Query 65520 TCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCA 65579 | || ||||| ||||| | | |||||||| | ||||||||||||||| || || Sbjct 35828 TTCA--CTATCGTATGGAATACGCATAAGAATAAATGTGTCTGCTAATCCTTGCACTCCT 35885 Query 65580 ATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTA 65639 ||||| || ||||| |||||| |||| || ||| |||||| |||| || ||||||||| Sbjct 35886 ATACCAATTGGTCTGTGTCTCATATTGGATGTTTTAGCTTCAGGAACTGGGTAATAATTA 35945 Query 65640 ATATCTATAATTTTATTGAGATTTCTGACA-ATTACTTTGACCACATCCTTCAGTTTGAG 65698 | || ||||||||||| ||||| ||| || | ||| || || || ||||| Sbjct 35946 ACTTCAATAATTTTATTAAGATT-CTGTGTTATGATTTTTGTAACTTCTTTTAGTTTATC 36004 Query 65699 AAAATCAAATCGCTCATCT--ATT-ACAAACATGTTCAATGCAACAGATGCCAGATTACA 65755 ||||| || | |||| ||| ||||||||||| | ||||| ||| |||| ||| || Sbjct 36005 AAAATTGTATGTTTTATCTTCATTGACAAACATGTTAAGTGCAATAGAGGCCAAATTGCA 36064 Query 65756 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 65815 ||| || ||||||| ||| | || | | ||| ||||| || | ||| || ||||| Sbjct 36065 AACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACACAAATTGCTGCACTT 36124 Query 65816 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 65875 || ||||||| ||||| ||| ||||| || ||| |||| || ||||| | || | Sbjct 36125 AATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTCTTTATACAACATATA 36184 Query 65876 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 65935 ||| || || ||||| | || | ||||||||| |||||||| | | |||| || | Sbjct 36185 TGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACAGAGCCTGAGCTTTAAC 36244 Query 65936 TATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCT 65993 | | || | || |||||| |||| ||| | || | | || || || ||| Sbjct 36245 TT--GCTTAACAAATCGATTTTCTTTTTCATATTTCTTGTATAGTGCCTCAAATTCTTCT 36302 Query 65994 CCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 66053 |||||| || | || || ||||| |||| |||||||| | ||| | | | | | Sbjct 36303 CCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAGACTCCAATTTTCATTA 36362 Query 66054 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTT 66113 || |||| ||||||||| | |||||| ||||| | ||| ||| | ||||| | | Sbjct 36363 CTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAAAAGAGTTCTCTAGCT 36422 Query 66114 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGC 66173 | ||| || || || ||||| ||||| ||||| | ||| | | |||||| |||| Sbjct 36423 CGTACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTCGAAAATATCTGCATGC 36482 Query 66174 CACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 66233 || ||||||||||||| || | | ||||||| ||||| || || || ||||||| ||| Sbjct 36483 CATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCCCCCTTGATCTACATAT 36542 Query 66234 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 66293 || || || || ||||| |||| |||||| || | || |||||||| |||||| || Sbjct 36543 CTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATTGGAGACACCATTTGTT 36602 Query 66294 CCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTG---ATAGA--CCTATTCCCC 66348 || | ||||| | || | || | ||| | || || || || || || | Sbjct 36603 CCAGCAATATAAGTGCCTTTGGC-----TCTTATGCAGTGAACATGGACTCCAATACCTC 36657 Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 66408 | || |||||| ||||| || ||| | ||||| || ||||| ||||| || ||||||| Sbjct 36658 CAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATATGCCTTCAATACTAT 36717 Query 66409 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 66468 ||||| |||| || || || || ||| | || | || ||| | || || Sbjct 36718 CATCCTTCATTGCAACTAAGAAGCATGAAGATAGCTGTGGTCGTGGCGTTGCTGCTGAAA 36777 Query 66469 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 66528 |||| || || || || ||||| ||||||| || |||| ||| || || ||||| | Sbjct 36778 ATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAGTAAATTATATGTATCAATTG 36837 Query 66529 CTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587 | | || ||||| || | || ||||||| | |||||||| | |||||| || || Sbjct 36838 CAGCATCAATATCTTCACCG-TGTATTCCTATAGACACACGCATCAGCATGTGTTGTGGC 36896 Query 66588 CTTTCA 66593 | |||| Sbjct 36897 CGTTCA 36902 Score = 86.0 bits (94), Expect = 8e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 66599 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658 |||||||||||| ||||||||||| ||| |||||||||||||||||||| ||||| || Sbjct 36990 CTTGTTGTTTATCTTCAACAAGTATGATCGCTCCAAAGTTTTAAAACCAAAGTAGTTATA 37049 Query 66659 TGAAAAGTCTCGTTCGTAAATAATA 66683 | ||| |||| || || | |||| Sbjct 37050 TTTAAAATCTCTGTCATACACAATA 37074 >seq200 Length=575180 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 ||||| || || || | || || ||||| ||||| |||||||||||||| || ||||| Sbjct 474171 TACATCTCTGAGTGCACATTCTCCATGGCTATTTGGAATCCGTAGAAACACCTTGCCTCC 474112 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 || | || |||||| | |||| || | | ||||||||| || || |||||| Sbjct 474111 GTCACTTGCACTTCTTGCGAGAATCTCTCAACAAGATTTTCATTGACAATACCGTCAGAT 474052 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 36610 || ||||| || |||| |||||| || || |||| | | ||| Sbjct 474051 GCAGCAAAGAATGCCAGTACATGCTTGATGAAATGTCTCTCG 474010 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 || |||| ||| ||||| ||||| ||||| || || || || |||||||| ||||| | | Sbjct 473531 TTTGATAGATCAACTTCCTCCACGGTCCAGAAAGAAGCTTCGGCCTTTTTGTACATCTCC 473472 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 || || ||| | |||||||| || ||||||||||| Sbjct 473471 CAAATATCAGGGTATTGAATGGGGAAAATAACAAA 473437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658001090943640