Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq616 627 1e-174 seq200 104 3e-17 >seq616 Length=113079 Score = 627 bits (694), Expect = 1e-174 Identities = 1208/1760 (69%), Gaps = 44/1760 (3%) Strand=Plus/Plus Query 78738 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAA 78797 ||| ||||| ||||||||||| |||||||| ||||| | ||| | |||| || || Sbjct 35162 TGCAGGTTTAGTACGTAGATAATACATTCCTGTTTTCAAACCCATTTTCCAGGAATAAAA 35221 Query 78798 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 78857 ||| ||| ||||| || |||| | || ||||| | ||| || || | ||||| || Sbjct 35222 ATGAATAGAAGTTAGCTTCCCATAATTAGGTTCTGCAACATGAATGTTGAATGATTGGCT 35281 Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 78917 |||||| || || |||||||||||||| ||||||| || | ||||| | |||||| Sbjct 35282 TTGATCTATAAATGCTCCCCTGTCTGCTGCCATTTGAATAGTGGTCTTAACAGAAATTTC 35341 Query 78918 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTT---TGTATTCT--GAAT 78971 ||||| |||||| || || || || ||| |||| |||| || | || || | || Sbjct 35342 CCAAACAGTTTTGTACAAATCTCT-AATTTCTTTAGGAA--TTACCTCAATGCTTTGTAT 35398 Query 78972 GGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGT 79031 ||| ||| | || || || || || ||||||| ||| |||| || || Sbjct 35399 GGAGCCATTGTTGTGGATGATAAGGTTTTTCATGTCTTCATCCCACAATTCAGCTTCTGT 35458 Query 79032 TAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATAC---TCTCCG 79088 | | | | | ||||| ||||||| ||||||||||| || || | || |||| | Sbjct 35459 GAGATCACGTAATAGATGGTGATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCTG 35518 Query 79089 AGTGTAAATATTACTGGTATATGG-TTCCACCGATTCATTATTTCCCAAAATTTGAGCAG 79147 | || ||||| ||| ||||| ||| | || |||||||| || | ||||||||| | Sbjct 35519 A---TATATATTGGAGGT-TATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGCTG 35574 Query 79148 TTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--AT 79205 | ||||| || ||||| || || || || | |||||||| || ||| | || || Sbjct 35575 TAGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTTCTAAGGCC--ATGTTTTGCAAT 35632 Query 79206 TTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATA 79265 ||| ||||| | | ||| ||||| | | || || |||||| | ||| || Sbjct 35633 TTTTTCTTTCAAGGCAGTCCAGTCCCACAAGTTAGTTGGAGTCTTATTCCACATATCGTA 35692 Query 79266 TTGTAGAATACCGTTACTAGC--GTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323 ||||| ||| || | || || | || ||| || |||||||| ||| | ||| Sbjct 35693 TTGTAAAATTCCTTGGCTCGCCGGACTG--CCTTCATAAGTTTCATAGACTCCATATTTT 35750 Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383 |||||||||| ||| || || || | ||||||||||||||| ||||| || || | | | Sbjct 35751 TCGGCTAATTGACAGCTTGCTTCAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGA 35810 Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443 || || | | || | ||||| ||||| | | |||||||| | ||||||| Sbjct 35811 TTTAGCTTTATGGCCGGTTCACTATCGTATGGAATACGCATAAGAATAAATGTGTCTGCT 35870 Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503 |||||||| || || ||||| || ||||| |||||| |||| || ||| |||||| ||| Sbjct 35871 AATCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATTGGATGTTTTAGCTTCAGGA 35930 Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563 | || |||||||||| || ||||||||||| |||||| ||| | ||| || Sbjct 35931 ACTGGGTAATAATTAACTTCAATAATTTTATTAAGATTCTGTGTTATGATTTTTGTAACT 35990 Query 79564 TCCTTTAGTTTGAGAAAATCAAATCGTCCATCT--ATT-ACAAACATGTTCAACGCGACA 79620 || |||||||| ||||| || | |||| ||| ||||||||||| | || | | Sbjct 35991 TCTTTTAGTTTATCAAAATTGTATGTTTTATCTTCATTGACAAACATGTTAAGTGCAATA 36050 Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||| ||| ||||| || ||||||| ||| | || | | ||||||||| || Sbjct 36051 GAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACAC 36110 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 | || || |||||||| ||||||| ||||| ||| ||||| || ||| |||| || Sbjct 36111 AAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTCT 36170 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 ||||| | || | || || || ||||| | || | ||||||||| |||||||| | Sbjct 36171 TTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACAGA 36230 Query 79801 ACTCGAGCCTTTATTA--TAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATC 79858 | |||| || | | | || ||| |||||| |||| |||| | |||| | Sbjct 36231 GCCTGAGCTTTAACTTGCTTAACAA--ATCGATTTTCTTTTTCATATTTCTTGTATAGTG 36288 Query 79859 GTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACG 79918 || || || ||||||||| ||| |||| || ||||| || | ||||||||| | Sbjct 36289 CCTCAAATTCTTCTCCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAGAC 36348 Query 79919 ACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 79978 ||| | | ||| | || ||||| ||||||||| | |||||| ||||| | ||| || Sbjct 36349 TCCAATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAAA 36408 Query 79979 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 80038 | || ||||| | || || || || || ||||| ||||| ||||| | ||| | | Sbjct 36409 AGAGTTCTCTAGCTCGTACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTCGA 36468 Query 80039 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTC 80098 |||||| | |||||| ||||||||||||| || | | |||| || ||||| || || | Sbjct 36469 AAATATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCCCC 36528 Query 80099 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 80158 | ||||||| ||||| || || || ||||| |||| |||||| || | || ||||||| Sbjct 36529 CTTGATCTACATATCTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATTGG 36588 Query 80159 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG---ATA 80215 | |||||| || || | ||||| | || |||| | ||| | || || Sbjct 36589 AGACACCATTTGTTCCAGCAATATAAGTGCCTTTGGC-----TCTTATGCAGTGAACATG 36643 Query 80216 GA--CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 || || || || || || |||||| ||||| || ||| | ||||| || ||||| || Sbjct 36644 GACTCCAATACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATAT 36703 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 ||| || || |||||||| |||| || || || || ||| | || | || Sbjct 36704 GCCTTCAATACTATCATCCTTCATTGCAACTAAGAAGCATGAAGATAGCTGTGGTCGTGG 36763 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 ||| | || |||||| || || || || ||||| ||||||| ||||||| ||| Sbjct 36764 CGTTGCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAGTAAATT 36823 Query 80394 GTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATTA 80452 || || ||||| || | || ||||| || | || ||||||| | |||||||| | Sbjct 36824 ATATGTATCAATTGCAGCATCAATATCTTCACCG-TGTATTCCTATAGACACACGCATCA 36882 Query 80453 ACATGTGCTGAGGTCTTTCA 80472 |||||| || || | |||| Sbjct 36883 GCATGTGTTGTGGCCGTTCA 36902 >seq200 Length=575180 Score = 104 bits (114), Expect = 3e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 ||||| || || || | || || ||||| || || |||||||||||||| || ||||| Sbjct 474171 TACATCTCTGAGTGCACATTCTCCATGGCTATTTGGAATCCGTAGAAACACCTTGCCTCC 474112 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 || | ||||||||| | |||| ||| | | ||||||||| || || |||||| Sbjct 474111 GTCACTTGCACTTCTTGCGAGAATCTCTCAACAAGATTTTCATTGACAATACCGTCAGAT 474052 Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG 50415 || ||||| || |||| |||||| || || |||||| | ||| || Sbjct 474051 GCAGCAAAGAATGCCAGTACATGCTTGATGAAATGTCTCTCGCTG 474007 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 || |||| ||| ||||| ||||| ||||| || || || || |||||||| ||||| | | Sbjct 473531 TTTGATAGATCAACTTCCTCCACGGTCCAGAAAGAAGCTTCGGCCTTTTTGTACATCTCC 473472 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || || ||| | ||||| || |||||||||||||| Sbjct 473471 CAAATATCAGGGTATTGAATGGGGAAAATAACAAA 473437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718081412648440