Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq616 581 4e-161 seq200 105 9e-18 >seq616 Length=113079 Score = 581 bits (644), Expect = 4e-161 Identities = 1191/1756 (68%), Gaps = 36/1756 (2%) Strand=Plus/Plus Query 70821 TGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAA 70880 ||| | ||| ||||||||||| ||||| |||||||| | ||| | |||| ||||| Sbjct 35162 TGCAGGTTTAGTACGTAGATAATACATTCCTGTTTTCAAACCCATTTTCCAGGAATAAAA 35221 Query 70881 ATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACT 70940 ||| ||| ||||| || ||| |||| || || | ||||| || | || || || Sbjct 35222 ATGAATAGAAGTTAGCTTCCCATAATTAGGTTCTGCAACATGAATGTTGAATGATTGGCT 35281 Query 70941 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 71000 |||||| || || |||||||||||||| ||||||| || | ||||| | |||||| Sbjct 35282 TTGATCTATAAATGCTCCCCTGTCTGCTGCCATTTGAATAGTGGTCTTAACAGAAATTTC 35341 Query 71001 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTT---TGTATTCT--GAAT 71054 ||||| |||||| || || || || ||| |||| |||| || | || || | || Sbjct 35342 CCAAACAGTTTTGTACAAATCTCT-AATTTCTTTAGGAA--TTACCTCAATGCTTTGTAT 35398 Query 71055 GGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGT 71114 ||| ||| | || || ||||| || ||||||| ||| |||| || || Sbjct 35399 GGAGCCATTGTTGTGGATGATAAGGTTTTTCATGTCTTCATCCCACAATTCAGCTTCTGT 35458 Query 71115 TAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATAC---TCTACG 71171 | | | | | ||||| ||||||| ||||||||||| || || | || ||| | Sbjct 35459 GAGATCACGTAATAGATGGTGATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCTG 35518 Query 71172 AGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGT 71231 | || ||||| ||| ||||| | |||||||||||| || | ||||||||| || Sbjct 35519 A---TATATATTGGAGGTTATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGCTGT 35575 Query 71232 TGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTT 71291 ||||| || ||||| || || || || || |||||||| |||||| | ||||| Sbjct 35576 AGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTTCTAAGGCCATGTTTTGCAATTTT 35635 Query 71292 ATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNN 71351 ||||| | | ||| | ||| | | | ||| Sbjct 35636 TTCTTTCAAGGCAGTCCAGTCCCACAAGTTAGTTGGAGTCTTATTCCACATATCGTATTG 35695 Query 71352 NNNNATGCCGTTACTAGC--GTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCG 71409 || || | || || | || ||| |||| || || || ||| | ||||||| Sbjct 35696 TAAAATTCCTTGGCTCGCCGGACTG--CCTTCATAAGTTTCATAGACTCCATATTTTTCG 35753 Query 71410 GCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTG 71469 |||| || ||| || || || | |||||| |||||||| ||||| || || | | ||| Sbjct 35754 GCTAATTGACAGCTTGCTTCAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGATTT 35813 Query 71470 AGATCTTGTGCTTCCGGG---CTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 71526 || | || || |||| ||||| ||||| | | |||||||| | ||||||| Sbjct 35814 AGCT-TTATGG--CCGGTTCACTATCGTATGGAATACGCATAAGAATAAATGTGTCTGCT 35870 Query 71527 AATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGA 71586 |||||||| || || ||||| || |||||||||||| |||| || ||| |||||| ||| Sbjct 35871 AATCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATTGGATGTTTTAGCTTCAGGA 35930 Query 71587 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACT-ATTACTTTGACCAC 71645 | || |||||||||| || ||||||||||| ||||| ||| | || | ||| || Sbjct 35931 ACTGGGTAATAATTAACTTCAATAATTTTATTAAGATT-CTGTGTTATGATTTTTGTAAC 35989 Query 71646 ATCCTTTAGTTTGAGAAAATCAAATCTCCCATCT--ATT-ACAAACACGTTCAAGGCAAC 71702 || |||||||| ||||| || | |||| ||| ||||||| ||| | |||| Sbjct 35990 TTCTTTTAGTTTATCAAAATTGTATGTTTTATCTTCATTGACAAACATGTTAAGTGCAAT 36049 Query 71703 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCA 71762 ||| |||| ||| ||||| || ||||||| ||| | || | | |||||||| || Sbjct 36050 AGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACA 36109 Query 71763 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 71822 | ||| || ||||| || ||||||| ||||| ||| ||||| || ||| |||| || Sbjct 36110 CAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTC 36169 Query 71823 CTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 71882 ||||| | ||| | || || || ||||| | || | ||||||||| |||||||| | Sbjct 36170 TTTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACAG 36229 Query 71883 GACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCG 71942 | |||| || | | || ||| |||||| |||| |||| | |||| | Sbjct 36230 AGCCTGAGCTTTAACTTGCTTAACAAATCGATTTTCTTTTTCATATTTCTTGTATAGTGC 36289 Query 71943 TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 || || || ||||||||| || |||| || ||||| |||| |||||||| | Sbjct 36290 CTCAAATTCTTCTCCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAGACT 36349 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||| | | ||| | | ||||| ||||||||| | |||||| ||||| | ||| ||| Sbjct 36350 CCAATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAAAA 36409 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 || ||||| | || || || || || ||||| ||||| ||||| | ||| | | Sbjct 36410 GAGTTCTCTAGCTCGTACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTCGAA 36469 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 |||||| | |||||| ||||||||||||| || | | |||| || ||||| || || || Sbjct 36470 AATATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCCCCC 36529 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||||||| ||||| || || || ||||| |||| |||||| || | || |||||||| Sbjct 36530 TTGATCTACATATCTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATTGGA 36589 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGA 72300 ||||||| || || | ||||| | || |||| | || | || || | | Sbjct 36590 GACACCATTTGTTCCAGCAATATAAGTGCCTTTGGCTCTTATGCAGTGAACATGG--ACT 36647 Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || || || || || |||||| ||||| || ||| | ||||| || ||||| ||||| Sbjct 36648 CCAATACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATATGCCT 36707 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || |||||||||||| |||| || || || || ||| | || | || ||| Sbjct 36708 TCAATACTATCATCCTTCATTGCAACTAAGAAGCATGAAGATAGCTGTGGTCGTGGCGTT 36767 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 | || |||||| || || || || ||||| ||||||| ||||||| ||| || Sbjct 36768 GCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAGTAAATTATAT 36827 Query 72481 GTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGACACGCATTAACAT 72539 || ||||| || | || ||||| || | |||||||||| | |||||||| | ||| Sbjct 36828 GTATCAATTGCAGCATCAATATCTTCACCG-TGTATTCCTATAGACACACGCATCAGCAT 36886 Query 72540 ATGCTGAGGTCTTTCA 72555 || || || | |||| Sbjct 36887 GTGTTGTGGCCGTTCA 36902 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 |||||| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || Sbjct 36990 CTTGTTGTTTATCTTCAACAAGTATGATCGCTCCAAAGTTTTAAAACCAAAGTAGTTATA 37049 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 | ||| |||| || || | |||| | |||| Sbjct 37050 TTTAAAATCTCTGTCATACACAATAGCAGAAT 37081 >seq200 Length=575180 Score = 105 bits (116), Expect = 9e-18 Identities = 159/225 (71%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||||||| || || || ||| || || ||||| ||||| || |||||||| | Sbjct 474937 CCTCATCTCTAGAGATCAACTCATTGCTGAAGGTAAGTCCAGGCATGAGTCCACGCTTCT 474878 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| |||||| ||||| || ||||| || || ||||| | Sbjct 474877 TCAGCCAGAATATGGAGGCAAAGCTTCCAGAGAAGAAAATGCCTTCGACGGCGGCAAAAG 474818 Query 42207 CAATAAGTCTCTCTCCATAACCGGCACTGTCATG-----TATCCACTTTTGAGCCCAATC 42261 | | | ||||| || | || | ||| || ||||||| | ||||| || Sbjct 474817 CCACGATCCTCTCGCCGAAGGTGG--CGGTCTTGCTCGCGATCCACTGCAGCGCCCAGTC 474760 Query 42262 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 |||||||| || ||||| |||| || || ||||| || || || Sbjct 474759 TGCCTTCTTCTTCACACATGGCAAAGTCTCAATGGCGTTGAACAG 474715 Score = 102 bits (112), Expect = 1e-16 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42326 TCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTGAATGAATGTTTTCAATGG 42383 ||| | | |||||| ||||| | || || || ||| ||||| || | || || |||| Sbjct 474201 TCTCTGATATATGTGTCGATGAGCAATGAGTA--CATCTCTGAGTGCACATTCTCCATGG 474144 Query 42384 CCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTT 42443 | || || |||||||||||||| || ||||| || || || |||||| | |||| | Sbjct 474143 CTATTTGGAATCCGTAGAAACACCTTGCCTCCGTCACTTGCACTTCTTGCGAGAATCTCT 474084 Query 42444 CAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 42503 || | | |||||| || || || |||||| || ||||| || |||| |||||| || | Sbjct 474083 CAACAAGATTTTCATTGACAATACCGTCAGATGCAGCAAAGAATGCCAGTACATGCTTGA 474024 Query 42504 TAAAATATTTTTCG 42517 | |||| | | ||| Sbjct 474023 TGAAATGTCTCTCG 474010 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 || |||| ||| ||||| || || ||||| || || ||||| |||||||| ||||| | | Sbjct 473531 TTTGATAGATCAACTTCCTCCACGGTCCAGAAAGAAGCTTCGGCCTTTTTGTACATCTCC 473472 Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || |||||| | |||||||| |||||||||||||| Sbjct 473471 CAAATATCAGGGTATTGAATGGGGAAAATAACAAA 473437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670964108171960