Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq134 131 2e-25 seq107 129 9e-25 seq616 123 4e-23 seq458 109 8e-19 seq200 107 3e-18 >seq134 Length=761937 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 70421 GAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAG 70480 || || ||||| || | || ||| |||| | ||| | || ||||| || |||||||| Sbjct 22479 GAATTTGTACATACAACGGGGGACACTCATATTTATCTTAACCACATTGAACCATTAAAA 22420 Query 70481 GTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAA 70540 | ||||| || | | || | ||| ||||| | |||||||||||||||||||||||| Sbjct 22419 ATCCAACTACAAAGAGTACCAAAACCATTTCCAACTCTGGAGTTTGCTCGTAAAGTTGAA 22360 Query 70541 AATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAG 70600 ||| ||| |||||||| |||||||| || |||||||||||| | ||| | ||||| Sbjct 22359 TCTATAGACGACTTTAAGTATGAAGATTTCATCATAAAAGGTTACCAGCCACATCCTAAA 22300 Query 70601 ATTCCCATGGTTCTGGCTGT 70620 ||| |||| ||||||| Sbjct 22299 ATTGATATGGAAATGGCTGT 22280 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 70202 GATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCA 70261 |||||||| || ||||||| ||||||||||| |||| | |||||| |||||| Sbjct 24766 GATAGGAGAATGATAATGTGTGCATGGAATCCTTCAGACCTTGGGTTAATGGCTCTACCA 24707 Query 70262 CCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTTAATGTAT 70321 || || || ||| ||||||| || || | | ||| ||||| || ||| | ||| Sbjct 24706 CCATGCCATTGTCTGGCTCAATTCTATGTGGCCAGTGGAAAATTATCTTGCCAGCTATAT 24647 Query 70322 CAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTG 70381 || || ||||| ||||||||| | || || || || || || || |||||||| | || Sbjct 24646 CAAAGAAGTGCTGACATGGGCTTAGGAGTGCCATTCAATATAGCCAGCTATTCCTTATTA 24587 Query 70382 ACGCACATGATTGCTCACATTACCGGCCTG 70411 || || |||||||| ||||| || ||| || Sbjct 24586 ACACATATGATTGCACACATCACTGGCTTG 24557 >seq107 Length=920743 Score = 129 bits (142), Expect = 9e-25 Identities = 139/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 126746 TACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTTGTCTCCGGGTACTGTGTTTTTGT 126805 ||||||| | ||||||||| || || ||||||||||| ||||| || ||||| |||| Sbjct 106460 TACCGAGCCGGATGCCGCTGGGGTGCAGCGCGCTCTTGTCGCCGGGCACGGTGTTCTTGT 106401 Query 126806 TGCAAGCGATTCTGCACAGTTCGAGGATGCGCTCTGCCGGTGCTCCTGCGAGTCCCACAC 126865 |||| ||||| |||||||| || || | |||||| || || || || | ||| ||| | | Sbjct 106400 TGCAGGCGATGCTGCACAGCTCCAGCACGCGCTCGGCGGGCGCGCCGGTGAGCCCCGCGC 106341 Query 126866 TGCGCAAATCCACTAGAATCAGATGCACATCGGTACCGCCAGTGGTGACGGTGTAGCCTC 126925 |||||| ||||| || ||| ||||| || || ||||| || | || | |||||| | Sbjct 106340 TGCGCATGTCCACCAGCGCCAGGTGCACGTCCGTGCCGCCCGTCGCGATCGCGTAGCCGC 106281 Query 126926 GTGA 126929 | || Sbjct 106280 GCGA 106277 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 127204 GCAATCAAGCCCGCAA-TGTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGC 127262 |||| |||||||| || | || || ||||||||||| || | | || | || || Sbjct 102929 GCAA-CAAGCCCGGAAATATGAGCCATATCGGCCATGAGATACGCTCCATTCTCGTCCGC 102871 Query 127263 AATCTCTCGGAATCGTCTATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGAT 127322 ||| | |||||||||| | ||||| | | || | || || ||| | ||||| || || Sbjct 102870 AATTTGTCGGAATCGTTTGTAGTCAAGACAGCGGGAGTAACAGCTGATACCGGCGATTAT 102811 Query 127323 TAGCCTAGGTTTGAATAGATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGT 127382 ||| | ||||||||| || | || | ||||| ||||| ||||||| | | ||||| Sbjct 102810 TAGGCGAGGTTTGAACAGTCTCGCGGTTTCGGCCAGTTTATCATAGTCTATCAAGCCAGT 102751 Query 127383 CTGAGGATCCACCT 127396 || |||||||||| Sbjct 102750 CTTTGGATCCACCT 102737 >seq616 Length=113079 Score = 123 bits (136), Expect = 4e-23 Identities = 933/1484 (63%), Gaps = 44/1484 (3%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAAT---GTC 96862 |||||| || | ||| |||||| || || ||| | || |||| || |||| | | Sbjct 36602 AACAAATGGTGTCTCCAATGGCCTTGTCCCTATGTTGCGAGTGTATAA--CAATACTGCC 36545 Query 96863 ACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACC 96922 | |||| || || || ||||||||||| || || ||| | || || ||||||||||| Sbjct 36544 A-GATATGTAGATCAAGGGGGCAATAAACGTCCTGGAGCTTTTGCAGTATACTTGGAACC 36486 Query 96923 TTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGC 96982 ||||| || || |||| || || | || || ||||| ||||| ||||| | Sbjct 36485 ATGGCATGCAGATATTTTCGAATTCTTAGATCTGAAAAAAAATACTGGCAAAGAAGAAGT 36426 Query 96983 ACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042 |||||| || || | |||||||| | ||| | || ||||| || ||||| | || | Sbjct 36425 ACGAGCTAGAGAACTCTTTTATGCTTTATGGATACCTGATTTATTTATGAAAAGAGTAGA 36366 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCC---CGACTCGTCACCCGGTCTGTCCGATTG 97099 || | ||||| || ||||| || |||| || || || | | ||||| Sbjct 36365 GAGTAATGAAAATTGGAGTCTTATGTGTCCTCATGACT-GT--CCAGGCTTAGCAGATTG 36309 Query 97100 CTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAG 97159 ||||| ||||| |||||||| |||| | || || |||| |||| || | Sbjct 36308 TTGGGGAGAAGAATTTGAGGCACTATACAAGAAATATGAAAAAGAAAATCGATTTGTTAA 36249 Query 97160 ACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219 | ||| | || | | |||||||| || || | || || ||||| || ||||| Sbjct 36248 GCAAGTTAAAGCTCAGGCTCTGTGGAAAGCTATTATAGAAGCACAAGTAGAAACGGGAAC 36189 Query 97220 TCCGTACATTCTCTACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || || || | || || || |||| || ||||| || |||||| | | || | Sbjct 36188 ACCATATATGTTGTATAAAGA-CTCGTGCAACCGCAAAAGTAACCAAAAAAATCTAGGAA 36130 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338 | || ||| || |||| |||| || ||||| || |||||| | || | || ||| | Sbjct 36129 CTATTAAGTGCAGCAATTTGTGTACTGAAATAGTGGAGTACACTTCAGCTGATGAGGTTG 36070 Query 97339 CAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGT---AGAGGGTAAAGTGTTTA 97395 | |||||| | |||| || | || || |||||| || | |||| | | Sbjct 36069 CTGTTTGCAATTTGGCCTCTATTGCACTTAACATGTTTGTCAATGAAGATAAAACATACA 36010 Query 97396 ATCT---CAACCTATTGGCAAAGACGGTGC--GTCTGGTGACTAGGAATCTAAACAAGAT 97450 || | || ||| ||||| | | | | | || |||||| || || || Sbjct 36009 ATTTTGATAAACTA-----AAAGAAGTTACAAAAATCATAACACAGAATCTTAATAAAAT 35955 Query 97451 TATCGACAATGCACTCTATCCCA-TTCCCTCGGCTGCCAAGTCAAACTTTAAGCACCGAC 97509 ||| || | | | | | |||| |||| ||| | || || | | ||| ||| Sbjct 35954 TATTGA-AGTTAATTATTACCCAGTTCCTGAAGCTAAAACATCCAATATGAGACACAGAC 35896 Query 97510 CCATCGGTATAGGAGTGCAAGGCTACGCAGACGCTCTGGCCATGATGGGTATAGCCTACG 97569 | || ||||||||||||||||| | |||||| | | | ||| |||| | |||| Sbjct 35895 CAATTGGTATAGGAGTGCAAGGATTAGCAGACACATTTATTCTTATGCGTATTCCATACG 35836 Query 97570 A----GGAC--TCGATGCAGTTGAATCGTGACATTTTCGAAACCATCTACCATGCAGCAC 97623 | | || | || || | |||| | || || ||||| || || | | ||||| Sbjct 35835 ATAGTGAACCGGCCATAAAGCTAAATCAACAAATATTTGAAACAATTTATTACGGAGCAC 35776 Query 97624 -TGACGGAGAGTTGCCAACTGGCCAGAGTGCACGGAGTCTACGAATCGTACCACGGTAGC 97682 ||| | | || || ||| | ||| | | |||||||| ||| | || | || || Sbjct 35775 TTGAAGCA-AGCTGTCAATTAGCCGAAAAATATGGAGTCTATGAAACTTATGAAGGCAGT 35717 Query 97683 CCGACCAGTCGTGGAGAGTTGCACTTCGACCGAT--ACTCGGTGCACAGCCAA-AAGTGT 97739 ||| | || | ||| || || | ||| | | | | || | || ||| Sbjct 35716 CCGGCGAGCCAAGGAATTTTACAATACGATATGTGGAATAAGACTCCAACTAACTTGTGG 35657 Query 97740 GACTGGTCATCGTTGCGCAAAGACATTGCTCGGTACGGTTTGAGAAACTCTTTGCTGGTG 97799 |||||| | | ||| || | ||||| | || | |||||||| | | || Sbjct 35656 GACTGGACTGCCTTGAAAGAAAAAATTGCAAAACATGGCCTTAGAAACTCACTTTTAGTA 35597 Query 97800 GCACCGATGCCCACGGCTACCACTTCCCAAGTGTTTGGCAATGCTGAATCTTTTGAACCG 97859 || || |||||||| || | || | ||| | |||||||| ||| || |||||||| Sbjct 35596 GCTCCCATGCCCACAGCATCTACAGCTCAAATTCTTGGCAATAATGAGTCATTTGAACCC 35537 Query 97860 TTCACGTCAAACATGTACCAGAGACGCACCCAGTCTGGAGAGTTTCAATTGACCAACGTG 97919 | || || || || || ||||||||| | || || || |||||| | || Sbjct 35536 ATAACCTCCAATATATATCAGAGACGCGTTCTATCAGGTGAATTTCAAGTTGTTAATCAC 35477 Query 97920 CACTTGGTTCGAGA-CTTGGAACGGCTCAATCTGTGGAACGATGACATGGCCCAGTTGAT 97978 || | | || || || | ||| ||| ||||| | || |||||| | | || Sbjct 35476 CATCTATTACGTGATCTCACAGAAGCTGAAT-TGTGGGATGAAGACATGAAAAACCTTAT 35418 Query 97979 CATGTACAACAATGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGA-A 98037 ||| |||||||||| ||||| |||| |||| | || || |||| | | ||| Sbjct 35417 CATCCACAACAATGGCTCCATACAAAGCATTGAGGTAATTCCTAAAGAAATTAG-AGATT 35359 Query 98038 TCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAG 98097 | ||||| ||||| ||||| ||| | ||||| || | ||||| || ||||| | Sbjct 35358 TGTACAAAACTGTTTGGGAAATTTCTGTTAAGACCACTATTCAAATGGCAGCAGACAGGG 35299 Query 98098 GTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTC 98157 | | | || || || || ||||| ||||| | | ||||| || || | || | Sbjct 35298 GAGCATTTATAGATCAAAGCCAATCATTCAACATTCATGTTGCAGAACCTAATTATGGGA 35239 Query 98158 GTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATC 98217 | ||||| || || ||||| | ||||| | ||| | || || || ||||| |||| Sbjct 35238 AGCTAACTTCTATTCATTTTTATTCCTGGAAAATGGGTTTGAAAACAGGAATGTATTATC 35179 Query 98218 TGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 | | || || | || | || || |||| |||||| || ||| Sbjct 35178 TACGTACTAAACCTGCAGCAAACGCTATACAATTTACTGTAGAC 35135 >seq458 Length=189668 Score = 109 bits (120), Expect = 8e-19 Identities = 170/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 50356 CATGTTTGCAATCAATACGAGTCTAATGATTGCGGCCACATTGTACACGATCCTATTCCT 50415 ||||||| | |||||||| | | ||| || |||||| || || || | || || | Sbjct 181055 CATGTTTACTATCAATACAACCTTGATGGTTTTGGCCACGTTACACGCGCTGCTGTTTTT 180996 Query 50416 AAAATGGCAAACTCGACCAGAGCAAAAATCCCTCAAAGAGACTGGCCTCAAGAATGCACT 50475 |||||||||| |||| ||||| ||||| || ||||| | ||| | || ||| | | Sbjct 180995 GGAATGGCAAACAAGACCCGAGCAGAAATCGCTGAAAGAAGCCGGCGTGAAAAATCCGAT 180936 Query 50476 CGGAGACTTTTTCGATTTGGAAAACATCAACACTACCCTGAATATTCTAGTGAAAAAGAG 50535 | ||||||||||| | | |||||| | || |||| | | || ||||| ||| Sbjct 180935 CACGGACTTTTTCGACATAAACAACATCTTTAAAACAGTGAAAACTTTAACGAAAAGGAG 180876 Query 50536 GCCCAACAATCGGCGACTCTTTTTGTGGTTCATTTTGCTGTCGATGGCCTTTTATACGTT 50595 | || || || |||| ||||| |||||| | ||| |||| ||||| |||||||| || Sbjct 180875 ATCAAATAACCGAAGACTATTTTTATGGTTCCTATTGATGTCTATGGCGTTTTATACTTT 180816 Query 50596 TCA 50598 || Sbjct 180815 CCA 180813 Score = 93.3 bits (102), Expect = 6e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 49961 ACTGTGTCTACATTTCATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTG 50020 || || |||||||| |||||||||||||| |||| ||||| |||||||| || | | Sbjct 184390 ACAGTATCTACATTCCATCAGTGGAACGGCATAGCGAGTCACGTGGTGCCACTTCTCCTT 184331 Query 50021 GCCTTTTTCCTAGGATCCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGA 50080 || |||||||| || || ||||| |||| || ||| ||||| || || | | || Sbjct 184330 GCATTTTTCCTGGGCTCTTATAGCGATAAACGAGGTCGAAAGTTTATATTGCTTGCGGGC 184271 Query 50081 CTCGTAGGTAAACTCTTTTTCTCGGCAATGCTAACCGTAAA 50121 || | || ||||| | |||||||| ||| | || || || Sbjct 184270 CTTATTGGCAAACTTTATTTCTCGGTGATGATTACTGTTAA 184230 >seq200 Length=575180 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGC 125476 || ||| || | ||||| || |||||||| || ||||| ||||| || || || ||||| Sbjct 474801 CGGCGAGAGGATCGTGGCTTTTGCCGCCGTCGAAGGCATTTTCTTCTCTGGAAGCTTTGC 474860 Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTT 125536 |||| || ||||| |||||||| ||||||||||| ||||| || ||| || ||||| Sbjct 474861 CTCCATATTCTGGCTGAAGAAGCGTGGACTCATGCCTGGACTTACCTTCAGCAATGAGTT 474920 Query 125537 TATATCTCGAGACGAGG 125553 || ||| |||| |||| Sbjct 474921 GATCTCTAGAGATGAGG 474937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740865866917960