Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq158 89.7 4e-13 seq36 86.0 4e-12 >seq158 Length=707457 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 43878 ACATATCCAATCATCAACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTT 43937 ||| | |||||||| ||||||||| | || | |||||| || || ||| ||||| | Sbjct 607320 ACAAAACCAATCATTTACCTCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCT 607261 Query 43938 GAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACC 43997 | ||||| ||||| | ||| |||| ||||| || || || || || || | | Sbjct 607260 GGATATTGTAATCAGACAGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTC 607201 Query 43998 GTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAG 44057 | || |||||| |||| | ||||||||||||| || || || || | | | | Sbjct 607200 GCTGTTGGTCCGGAGGGATACCTTCTTTATCTTGGATCTTAGCCTTCACATTTTCGATGG 607141 Query 44058 TATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTT 44117 | |||| | |||||| || | || || || || || |||| || || || ||||| | Sbjct 607140 TGTCTGAAGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCT 607081 Query 44118 GCAT 44121 |||| Sbjct 607080 GCAT 607077 >seq36 Length=1647457 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGT 43970 |||||| || || ||| || || ||||| || || || || | || ||| |||| | Sbjct 937536 CACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGATAGAGTG-CGCCCATCTT 937594 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 | || || ||||| ||||| || | || ||||| || |||| | |||||||| ||| Sbjct 937595 CTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTT 937654 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||||| || || | ||| ||| |||| ||||| || || | || || |||| Sbjct 937655 GGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTTT 937714 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || ||||||||||| || || || ||||| Sbjct 937715 TCCCAGTTAAAGTCTTTACGAAGATCTGCAT 937745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354687356884908