Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq44 228 7e-55 seq4 87.8 2e-12 >seq44 Length=1464967 Score = 228 bits (252), Expect = 7e-55 Identities = 346/490 (71%), Gaps = 2/490 (0%) Strand=Plus/Minus Query 101486 GGGTTGGCGCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTC 101545 ||||| || || ||||| || || ||||||||||| || || || || || || |||||| Sbjct 1426893 GGGTTAGCTCCCTTACCTCCAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTC 1426834 Query 101546 CAAACCTGCAAAAATTCTTTGACAGAATCCACAAACACACGCCGTTTTATCGC-GTCGTG 101604 || ||| ||||| || ||||| ||| | || || | | | ||| | ||| | Sbjct 1426833 CAGGTCTGTAAAAAGTCCTTGACTGAACCAACGAAG-CGGTCTCTCTTAACTTTGTCATC 1426775 Query 101605 CATATAATAGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGTG 101664 | | |||| || || | || ||||| || |||| || || | ||| || |||| Sbjct 1426774 GAAGAAGAAGAAGGGATCAGCCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAGGTC 1426715 Query 101665 TGGATTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCA 101724 || |||||| ||| | ||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 1426714 AGGTTTGGCCTGTTTCAACATCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATTCCA 1426655 Query 101725 AGCAGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTTT 101784 | |||| || ||||| || ||||| | || ||||||||||||||||| | ||||| Sbjct 1426654 GGACGATAAGCCCTTCTGTGGCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATACTTT 1426595 Query 101785 AAAATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTTT 101844 || ||| || || ||| || ||||||| |||| |||||||| || || Sbjct 1426594 GAAGTCTTCCCGACCGCTGCAGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTCCTT 1426535 Query 101845 GAGGGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTGA 101904 | |||||||| |||||| ||||| ||||| || ||||| |||||||| || || | Sbjct 1426534 CAAACTGTCGTTAATGCCATCACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTGGGT 1426475 Query 101905 GAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTAC 101964 |||||||| | || |||||||| || || || || || ||||||||||||||||| Sbjct 1426474 CAGGTTGGGAACGGGAACTTTGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTCTAC 1426415 Query 101965 AAAATACGCA 101974 || |||||| Sbjct 1426414 GAAGTACGCA 1426405 >seq4 Length=2913607 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 22347 GCACGGTTTTCACGTGCACGAATTTGGCGACACAAGCAATGGGTGCACGTCGGCAGGCGA 22406 ||||||||| |||||||| || || || |||| | || || ||||| ||||| |||| Sbjct 2347857 GCACGGTTTCCACGTGCATGAGTTCGGTGACAACACAAACGGCTGCACATCGGCCGGCGC 2347916 Query 22407 GCACTTTAACCCTACGCACCGGCAACATGGCGCGCCTGACGCTGCGGAGCGTCACGTCGG 22466 |||||||||||| | | | | | || || | || ||||| | | |||||||||||| Sbjct 2347917 GCACTTTAACCCGCTGAAGCAGGAGCACGGTGGCCCCGACGCGTCCGTGCGTCACGTCGG 2347976 Query 22467 CGATTTGGGCAAC 22479 ||| | |||||| Sbjct 2347977 TGATCTCGGCAAC 2347989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419480471570751