Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq200 86.0 5e-12 >seq200 Length=575180 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 13445 TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCT 13504 ||||| ||||| || | ||| ||||| ||||||||||| || || ||||| || ||||| Sbjct 474171 TACATCTCTGAGTGCACATTCTCCATGGCTATTTGGAATCCGTAGAAACACCTTGCCTCC 474112 Query 13505 GATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTA 13564 | || || ||||| | ||||| || | | ||||| || || || |||||| Sbjct 474111 GTCACTTGCACTTCTTGCGAGAATCTCTCAACAAGATTTTCATTGACAATACCGTCAGAT 474052 Query 13565 GCAGCaaaaaaaGCAAGTATGTGCTTAATAAA 13596 |||||||| || || |||| ||||| || || Sbjct 474051 GCAGCAAAGAATGCCAGTACATGCTTGATGAA 474020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430872773027142