Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 5e-12 >seq36 Length=1647457 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48497 AAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCA 48556 || || ||||| | | || |||||||| | || |||||||| || ||||| || Sbjct 935533 AAGCCGCCGCGAAGTCGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCG 935592 Query 48557 GCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACC 48616 | | || ||||||| |||||||||||| | | || | |||||||||||| Sbjct 935593 GAGAGAGTACGGCCGTCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGA 935652 Query 48617 GGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676 || | | |||||||||| |||||| ||| | | | | || || || | || |||| Sbjct 935653 GGAATGCCTTCCTTGTCCTGAATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCC 935712 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||| || ||||||||||| || || || || || || ||||| Sbjct 935713 ACTTCAAGTGTGATCGTTTTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || || || || ||| |||||||||||||||||||||| || || || | ||||| Sbjct 455582 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGA-AAGGGTGCGGCCATCCTC 455524 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||| || ||| | | || || |||||||| || || | | ||| ||||| Sbjct 455523 AAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTG 455464 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | | || || || | || ||| ||| | || |||||||| Sbjct 455463 GATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTT 455404 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| ||||| ||||| ||||| |||||||| Sbjct 455403 ACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421144048306871