Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1303 120 2e-22 seq1107 120 2e-22 seq648 120 2e-22 seq77 120 2e-22 seq10 120 2e-22 seq792 118 6e-22 seq111 118 6e-22 seq29 118 6e-22 seq201 116 2e-21 seq177 116 2e-21 seq10487 114 7e-21 seq138 114 7e-21 seq89 114 7e-21 seq76 114 7e-21 seq39 114 7e-21 >seq1303 Length=22397 Score = 120 bits (132), Expect = 2e-22 Identities = 79/88 (90%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 19663 TAAAAAATAATCATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 19722 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 19723 CGCTCTAACCAACTGAGCTAATGGGCCG 19750 >seq1107 Length=37609 Score = 120 bits (132), Expect = 2e-22 Identities = 79/88 (90%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 3453 TAAAAAATAATCATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 3394 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 3393 CGCTCTAACCAACTGAGCTAATGGGCCG 3366 >seq648 Length=105094 Score = 120 bits (132), Expect = 2e-22 Identities = 86/98 (88%), Gaps = 4/98 (4%) Strand=Plus/Plus Query 11437 AATTAATAA--AAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTT 11492 |||||| || ||||| | || |||||||||| |||||||||| ||||||||||||| Sbjct 20992 AATTAAAAAGGAAAATGAGATAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTT 21051 Query 11493 ATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||| ||||||||||||||||||||| Sbjct 21052 ATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 21089 >seq77 Length=1103678 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||| ||| ||||| |||||||||| |||||||||| ||||||||||||||||| Sbjct 837847 AAATAAAAAAGAATCA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 837791 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||| ||||||||||||||||||||| Sbjct 837790 GCACGACGCTCTAACCAACTGAGCTAATGGGCCG 837757 >seq10 Length=2227192 Score = 120 bits (132), Expect = 2e-22 Identities = 92/106 (87%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 11430 AATATAGAATT-AATA-AAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCT 11485 || ||| |||| |||| |||||| ||| ||||||||| |||||||||| |||||| Sbjct 208057 AAAATATAATTGAATATAAAAATGGTATTATGGCCCATGAGGGGATCGAACCCGCGACCT 207998 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 207997 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 207952 >seq792 Length=75321 Score = 118 bits (130), Expect = 6e-22 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 21509 AAAAAAAAATGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 21568 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 21569 GCTCTAACCAACTGAGCTAATGGGCCG 21595 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 5019 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5078 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 5079 TGAGCTAATGGGCCG 5093 >seq111 Length=903850 Score = 118 bits (130), Expect = 6e-22 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 601222 AAAATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 601281 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||| Sbjct 601282 CAACTGAGCTAATGGGCCG 601300 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 549908 AACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 549967 Query 11513 AACTGAGCTAATGGGCCG 11530 |||||||||||||||||| Sbjct 549968 AACTGAGCTAATGGGCCG 549985 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 550327 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 550386 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 550387 TGAGCTAATGGGCCG 550401 Score = 113 bits (124), Expect = 2e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| Sbjct 601390 TGGCCCATGAGGGGATCGAACCCGCGACTTTCGCGTTATTAGCACGACGCTCTAACCAAC 601449 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 601450 TGAGCTAATGGGCCGT 601465 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 550492 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 550551 Query 11516 TGAGCTAATGGGCC 11529 ||||||||||| || Sbjct 550552 TGAGCTAATGGACC 550565 >seq29 Length=1751396 Score = 118 bits (130), Expect = 6e-22 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1416382 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1416441 Query 11515 CTGAGCTAATGGGCCGTCG 11533 |||||||||||||||| || Sbjct 1416442 CTGAGCTAATGGGCCGACG 1416460 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1413843 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1413784 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1413783 TGAGCTAATGGGCCG 1413769 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1416655 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1416714 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1416715 TGAGCTAATGGGCCG 1416729 >seq201 Length=558674 Score = 116 bits (128), Expect = 2e-21 Identities = 81/92 (88%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTG--GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||||| | ||| |||||||| |||||||||| ||||||||||||||||||| Sbjct 443612 AATAAAAAAAGATGTTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 443553 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||| ||||||||||||||||||||| Sbjct 443552 ACGACGCTCTAACCAACTGAGCTAATGGGCCG 443521 >seq177 Length=671190 Score = 116 bits (128), Expect = 2e-21 Identities = 88/104 (85%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 11430 AATATAGAATTAATAAAAAATCAAATT---GGCCCATGAAAGGATCGAACCTTCGACCTT 11486 |||||| || || | |||| || || ||||||||| |||||||||| ||||||| Sbjct 297874 AATATAAAAAAAAAACAAAAAGAATTTCGTGGCCCATGAGGGGATCGAACCCGCGACCTT 297933 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 297934 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 297977 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 653925 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 653866 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 653865 TGAGCTAATGGGCCG 653851 >seq10487 Length=998 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 117 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 176 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 177 TGAGCTAATGGGCCG 191 >seq138 Length=755800 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 363325 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 363266 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 363265 TGAGCTAATGGGCCG 363251 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 367338 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 367279 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 367278 TGAGCTAATGGGCCG 367264 >seq89 Length=996908 Score = 114 bits (126), Expect = 7e-21 Identities = 78/87 (90%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11444 AAAAAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 338903 AAAAAATGTTAAATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 338962 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 338963 CGCTCTAACCAACTGAGCTAATGGGCC 338989 >seq76 Length=1100350 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 994129 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 994070 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 994069 TGAGCTAATGGGCCG 994055 >seq39 Length=1559615 Score = 114 bits (126), Expect = 7e-21 Identities = 78/87 (90%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 || |||||| ||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct 277314 ATGAAAAATATAAT-GGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 277372 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||| ||||||||||||||||||| Sbjct 277373 ACGCTCTAACCAACTGAGCTAATGGGC 277399 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261424685709196