Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq36 152 5e-32 seq158 95.1 1e-14 >seq36 Length=1647457 Score = 152 bits (168), Expect = 5e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| || ||||||||||| | ||| ||||| | ||| | |||||| Sbjct 455582 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCA 455523 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| ||| ||||||| |||| ||||| ||||| ||||| ||||||||||| | Sbjct 455522 AGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGG 455463 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||||||| || ||| |||||| | | || || |||| ||||||||||| Sbjct 455462 ATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTTA 455403 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| |||||||||||||| Sbjct 455402 CCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| || ||||||||||| | ||| ||||| | ||| | |||||| Sbjct 455810 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCG 455751 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| ||| | ||||| |||| ||||| ||||| ||||| || || ||||| | Sbjct 455750 AGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 455691 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || | | |||||||| | || || || | || || |||||| Sbjct 455690 ATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACTTCCAGTGTAATAGTTTTT 455631 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||||||| || ||||||||||| Sbjct 455630 CCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | |||||| ||||| || | ||| || ||| | ||| | |||||| Sbjct 456264 CACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 456205 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| || | ||||| |||| ||||| ||||| ||||| ||||||||||| | Sbjct 456204 GAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTG 456145 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || |||||||| || | | ||||||| | || || |||| || || ||||| Sbjct 456144 GATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTT 456085 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || |||||||||||||| Sbjct 456084 GCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 116 bits (128), Expect = 3e-21 Identities = 152/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | ||| || || || || | ||| || || | ||| | |||||| Sbjct 456036 CACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATCCTC 455977 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| ||| | ||||| |||| ||||| ||||| ||||| ||||||||||| | Sbjct 455976 AAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTG 455917 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || |||||||| | | ||||||||| | || || || | || || ||||| Sbjct 455916 GATCTTTGCCTTTA---CATTCTCAGTGTCAGATGGTTCCACTTCCAGTGTAATTGTTTT 455860 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| |||||||| || ||||||||||| Sbjct 455859 TCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 || || |||||||||||||||||||| | || || ||| | ||| | ||||| Sbjct 935554 ACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCGTCCTCG 935613 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || ||| ||||||| | || |||||||| |||||||| ||||| ||||| | | Sbjct 935614 AGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGA 935673 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| ||||| || | | ||||||| | || || |||| ||||| ||||| Sbjct 935674 ATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGATCGTTTTA 935733 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||| Sbjct 935734 CCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | ||| || ||||| || | ||| || ||| | || | |||||| Sbjct 455355 CACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTC 455296 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| ||| | ||||| || | || || ||||| ||||| ||||||||||| | Sbjct 455295 AAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTG 455236 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| || | | |||||| | | || || |||| ||||| ||||| Sbjct 455235 GATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTGTTTT 455176 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || |||||||||||||| Sbjct 455175 GCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | || |||||||| || | ||| || || | |||| || | ||| Sbjct 937536 CACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTC--TGATAGAGTGCGCCCATCT 937593 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || | ||| |||||| |||| || | | ||||||||||||||||| ||||||||||| Sbjct 937594 TCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCT 937653 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||||| ||||| || | | |||||| | | || || || | ||||| ||| Sbjct 937654 TGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTT 937713 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| | ||| || || ||||||||||| Sbjct 937714 TTCCCAGTTAAAGTCTTTACGAAGATCTGCAT 937745 Score = 109 bits (120), Expect = 5e-19 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | ||| || ||||| || | ||||||||| | ||| | || || Sbjct 455127 CACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCGTCTTC 455068 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 | || ||||| ||||||| | || ||||||||||| ||||||||||| || || | Sbjct 455067 TAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGGAATACCTTCCTTATCTTG 455008 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 |||||| || |||||| | | |||||| | | || || || | ||||||||||| Sbjct 455007 AATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAACTTCGAGAGTGATGGTTTT 454948 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012 ||||| | ||||| || || |||||||| |||| Sbjct 454947 ACCAGTCAAGGTTTTTACGAAAATCTGCAT-CTTA 454914 Score = 109 bits (120), Expect = 5e-19 Identities = 173/247 (70%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| ||| ||| || ||| || | | || | || || |||| ||| || || | Sbjct 937271 TTTTTACGAAAATTTGCATTCCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTT 937330 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880 | || | ||| ||||| || |||| | ||||| |||||||||||| ||||||| | Sbjct 937331 TCTGAATGTTGTAATCTGACAGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAA 937390 Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940 || ||||||||||||||||| ||||| || || | ||||| || || || | | Sbjct 937391 GTCGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATTTTAGCTTTAACATTCTCAA 937450 Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 ||||| | | || || || | ||||| ||||| ||||| || || || ||||| | Sbjct 937451 TTGTGTCCGATGGTTCCACTTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAA 937510 Query 95001 TCTGCAT 95007 | ||||| Sbjct 937511 TTTGCAT 937517 >seq158 Length=707457 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | | | ||||||||| | ||| ||||| || || | || ||||| | Sbjct 607303 CCTCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAC 607244 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| ||| || ||| | ||||| | || || || || ||||| Sbjct 607243 AGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAGGG 607184 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || ||||| || ||| ||||| | || || Sbjct 607183 ATACCTTCTTTATCTTGGATCTTAGCCTTCACATTTTCGATGGTGTCTGAAGCCTCCACC 607124 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||||||| || || || || ||||| || || |||||||| Sbjct 607123 TCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCTGCAT 607077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448174246429560