Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1214 86.0 7e-12 >seq1214 Length=30633 Score = 86.0 bits (94), Expect = 7e-12 Identities = 178/265 (67%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 131863 TATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAATAGA 131922 ||||||||| || ||| ||||||||||| | |||| | ||| |||||| ||||| | Sbjct 14256 TATGACTCCCGTATTACCCATGTTGGCTGAAGCATGCAAGTCTGTAGAAATGGCAATGAA 14315 Query 131923 TAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAATTCA 131982 |||| | | | || |||| || || | || ||||| || || | |||||| | || Sbjct 14316 GAAATGTCCAAACGGCATGTTCTCTGAAATCAAGTATGACGGAGAAAGAGTACAAGTACA 14375 Query 131983 TAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCATAA 132042 |||||||| |||| || || |||| || ||||||||| || | ||||||| Sbjct 14376 TAAAAAAGGAAATGAATTTAAATATTACTCAAGGGCTTTAAAACCAGTGATGGCTCATAA 14435 Query 132043 AATTGATGGATTTGATAAACTGTTGACTGATGCATTTCCCACAGCAAAAAACTTCATTTT 132102 | | || ||| | || || | | |||||||| || ||| | | ||||| Sbjct 14436 AGTGAATCATTTTAAGGAATATTTACCCAAAGCATTTCCACAAGGAAATGATCTGATTTT 14495 Query 132103 AGATGCGGAATTAATAATGATAGAT 132127 ||||| || || ||||| | ||| Sbjct 14496 GGATGCAGAGGTATTAATGGTTGAT 14520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531762033730040