Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq44 251 7e-62 seq616 172 5e-38 seq62 104 2e-17 seq4 102 8e-17 seq158 91.5 1e-13 seq36 86.0 6e-12 >seq44 Length=1464967 Score = 251 bits (278), Expect = 7e-62 Identities = 795/1220 (65%), Gaps = 34/1220 (3%) Strand=Plus/Plus Query 62038 TAAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGA 62097 |||||| || | || || || || ||||||||||| || || |||| || || ||||| Sbjct 1426393 TAAAGTTGTCGGTGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGA 1426452 Query 62098 TCGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGG 62157 ||| || ||| || || | || | | || || || || || || |||||||| Sbjct 1426453 CAAAGTTCCCGTTCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGG 1426512 Query 62158 CGACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTC 62217 || ||||||||||||||| | ||| || |||||||| |||| || || || || Sbjct 1426513 TGATGGCATTAACGACAGTTTGAAGGAAATTGAGGGTAGTTTCCAAGCACTGCAACGCTC 1426572 Query 62218 GTGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAA 62277 || ||||| || ||||| ||||| || || || || || |||||||| | || || Sbjct 1426573 CTGCAGCGGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCAAAA 1426632 Query 62278 ACCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGAT 62337 ||||| || || | | ||||| || || ||||| || ||||| |||||| |||| Sbjct 1426633 GCCACAGAAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACTGAT 1426692 Query 62338 GGCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATT 62397 | |||| ||| || ||| || | || | | ||||| | || || ||||| | Sbjct 1426693 GATGTTGAAACAGGCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGTTGGACCCT 1426752 Query 62398 ATCCGATCCGTTCTTTTATTTTCACGATGTGGCCAAACGCAAGA------TTTTTGTCGA 62451 | ||||| ||||| | || |||| | |||| |||| || || | Sbjct 1426753 GGCTGATCCCTTCTTCTTCTT---CGAT---GACAAAGTTAAGAGAGACCGCTTCGTTGG 1426806 Query 62452 TTCCGTCATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGA 62511 ||| |||| || |||||||||||||||||||| |||||||| || || || |||||||| Sbjct 1426807 TTCAGTCAAGGACTTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGGA 1426866 Query 62512 GTTTCCCGGCGGGAAAGGCGCCAATCCCAACGTAGGCGACGTCGAACGCGATCGCGAAAC 62571 ||| || || || || || || || || || | || | ||| | ||| | |||| Sbjct 1426867 GTTCCCTGGAGGTAAGGGAGCTAACCCTGACCTTGGTG--GTCCTA-AAGATGGTGAAAT 1426923 Query 62572 GTACACGATTCTGTTGA--GAGATT-TACGCGAAGCCCTCGACCGTCTCTCAATCGA-AA 62627 ||| || || ||| ||| || || | | | | ||| | || || | Sbjct 1426924 ATACGTGACACTCATGAAGGAGCTTAGACAC-ATG--TTGGACGAGTTATCCGCTGAGAC 1426980 Query 62628 CGAATCGAACGTACGAATTGACTAGCGCGATCAGCGCCGGCGATGACAAAATTGCCGTAG 62687 || | ||| ||||| ||||| || ||||| || || ||||| ||| || | Sbjct 1426981 CGGAAAGAA-ATACGAGCTGACTTCTGCCATCAGTGCTGGGTGGGACAAGATTCAGGTTG 1427039 Query 62688 TCGATTACACTGAAGCGCAAAAATATTTGGATTATAtttttttAATGACATACGATTTCA 62747 || | |||| ||||| || || || |||| ||||||| | |||| ||||| |||| Sbjct 1427040 TCAACTACAAGGAAGCCCAGAACTACATGGACCATATTTTCGTGATGAGCTACGACTTCA 1427099 Query 62748 AAGGAGCTTGGTCGAATAGCGATTTGGGATATCAAACGACTCTGTACGCGCCTTCGTTTA 62807 | ||||| ||||| ||| | | | || | || || | | ||||| ||| || | Sbjct 1427100 AGGGAGCCTGGTCCAATGACACTCTTGGCCACCAGACCTCGTTATACGCTCCTGAGTGGA 1427159 Query 62808 ACCCTAAAGAGCATTATACGACCGATTTTGCCGTTCGTGCTAT----GCTCAAGCAAAAA 62863 | || || ||| ||| || || || |||| || | | | ||||| | | Sbjct 1427160 AACCCAAGGAGACTTACACTACTGACTTTGGTATTAGGTATCTTTTGGCTCAGG----GA 1427215 Query 62864 GTCGAAAACAAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGTTGGACCGGCGTC 62923 || | ||| ||| | | ||||| || || ||||||||||| || ||||| || ||| Sbjct 1427216 GTGCAGCCCAAGAAGCTGGTCGTCGGTGTTGCTATGTACGGTCGTGGATGGACTGGAGTC 1427275 Query 62924 GGTGACTTTGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAGGGACCGATCAAAGGT 62983 ||||| | | || ||| || || | || ||| | || || | |||||| Sbjct 1427276 CATGACT---ACAAGGACGATATCCCCTTCACAGGAGTAGCTGATGGCCCTGTTAAAGGT 1427332 Query 62984 ACCTGGGAGGACGGAGTCGTCGATTATAGAGAGATTTTTAATTCTTTTGTGGGTAAAGAC 63043 || ||| |||||||||| ||||| || || |||||| ||| ||| || | Sbjct 1427333 ACTTGGCAGGACGGAGTGGTCGACTACAGGGAGATTGCCAATGGAATTGCCAGTGGTCAG 1427392 Query 63044 GGCATTAATCGTTACGATTCCATCGCAAAAGCGGCATACGTCTTTAATAACGCGACCGGC 63103 | | ||| ||||| | || |||| |||||||||| ||| | || || Sbjct 1427393 TGGACCTATCACTACGACAAAGTAGCCCAAGCTCCATACGTCTTCAATCCTTCCACAGGA 1427452 Query 63104 GATCTCATAACCTACGACAGTCCTCAGTCGGTTCTGGATAAAGCAAAATATGTTTTGGAC 63163 || || | |||||||| | | ||| || | || |||| |||||||| | | Sbjct 1427453 GACCTTGTTACCTACGATGATTCGAGGTCAGTCATCGAGAAAGGCAAATATGTGAGGAAT 1427512 Query 63164 TATAATCTGGGTGGTCTGTTCGCGTGGGAGATCGATGCTGACAACGGATTGCTTCTAAAC 63223 | || || || ||||| ||||| ||||| || || ||||||||||| |||| ||| Sbjct 1427513 AACAAACTAGGCGGTCTTTTCGCTTGGGAAATAGACGCTGACAACGGTGATATTCTTAAC 1427572 Query 63224 GCAATGAACAGCGGTCTCGG 63243 |||||||||| || ||||| Sbjct 1427573 GCAATGAACATGGGCCTCGG 1427592 >seq616 Length=113079 Score = 172 bits (190), Expect = 5e-38 Identities = 887/1386 (64%), Gaps = 44/1386 (3%) Strand=Plus/Plus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || || ||||| || | ||||||||| ||||| || | | ||| ||||| || ||||| Sbjct 35139 ACAGTAAATTGTATAGCGTTTGCTGCAGGTTTAGTACGTAGATAATACATTCCTGTTTTC 35198 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT--ATAGGTTGGATTGG 147231 |||||| ||| ||| ||||| ||||| || | || ||| ||| | || | | Sbjct 35199 AAACCCATTTTCCAGGAATAAAAATGAATAGAAGTTAG--CTTCCCATAATTAGGTTCTG 35256 Query 147232 CCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGT 147291 | ||| || |||| |||||||| ||||| || | | ||||| ||||| ||||| | Sbjct 35257 CAACATGAATGTTGAATGATTGGCTTTGATCTATAAATGCTCCCCTGTCTGCTGCCATTT 35316 Query 147292 CCAACACTACTTTTTGTTTAA-TTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGT 147350 || | | | || || |||||||| | || ||| | | | | || | | Sbjct 35317 G-AATAGTGGTCTTAACAGAAATTTCCCAAACAGTTTTGTACAAATCTCTAATTTCTTTA 35375 Query 147351 GGAATTTCATCAATATTTTGTACAGATCCGTTGTTTT---TAATAATTTTTATCATGATA 147407 |||||| | ||||| |||||| || || ||||| | | |||| ||| ||||| Sbjct 35376 GGAATTACCTCAATGCTTTGTATGGAGCCATTGTTGTGGATGATAAGGTTTTTCATGTCT 35435 Query 147408 TCTGTCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTGA 147467 || | | || | | ||| ||| | | | ||||| ||||| || |||||| Sbjct 35436 TCATCCCACAATTCA---GCTTCTGTGAGATCACGTAATAGATGGTGATTAACAACTTGA 35492 Query 147468 TACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCG 147527 | || || || ||||| | || || | ||| || | || || || ||||| Sbjct 35493 AATTCACCTGATAGAACGCGTCTCTGATATATATTGGAGGTTATGGGTTCAAATGACTCA 35552 Query 147528 TTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTG 147587 || || || ||||| || || || | ||| || |||||| ||| | || | ||| || Sbjct 35553 TTATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTT 35612 Query 147588 CGTAAGCCGTGCATAGCCATTTCTCGCTT-AAGCTCGTCCCAGTTCCA-AAGATCATTCG 147645 | | ||| || | || |||| | || ||| |||| ||| ||| ||| | || | Sbjct 35613 CTAAGGCCATGTTTTGCAATTTTTTCTTTCAAGGCAGTCC-AGTCCCACAAGTTAGTTGG 35671 Query 147646 ATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGT 147705 | | | |||||||| ||| | ||||||| ||| || || || || || || | Sbjct 35672 AGTCTT----ATTCCACATATCGTATTGTAAAATTCCTTGGCTCGCCGGACTGCCTTCAT 35727 Query 147706 AAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCACCATA 147763 ||| || || ||| | || |||| || || | ||| ||| ||||| || || Sbjct 35728 AAGTTTCATAGACTCCATATTTTTCGGCTAATT-GACAGCTTG-CTTCAAGTGCTCCGTA 35785 Query 147764 ATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGGGCAT 147823 |||||| ||||| | || | || ||||| | | | ||| || || ||||| || || Sbjct 35786 ATAAATTGTTTCAAATATTTGTTGATTTAGCTTTATGGCCGGTTCACTATCGTATGGAAT 35845 Query 147824 ATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCT 147883 | || || || || || || | |||||| | || ||||| || |||| |||||| Sbjct 35846 ACGCATAAGAATAAATGTGTCTGCTAATCCTTGCACTCCTATACCAATTGGTCTGTGTCT 35905 Query 147884 GAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGAG 147943 | ||| |||| || ||| || | || ||| |||| | || ||||||||||| || Sbjct 35906 CATATTGGATGTTTTAGCTTCAGGAACTGGGTAATAATTAACTTCAATAATTTTATTAAG 35965 Query 147944 ATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAAGCTTTTAAACTG 148003 ||| | || | | | | | || | | || | ||| | | | ||||| | Sbjct 35966 ATTCTGTGTTATGATTTTTGTAACTTCTTTTAGTTTATCAAAATTGTATGTTTTA---TC 36022 Query 148004 TTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCGTTTC-TCGAT 148062 || |||| |||| | || | ||||| |||||||| || || || || || || Sbjct 36023 TTCATTGACAAACATGTTAAGTGCAATAGAGGCCAAATTGCAAACAGCAACCTCATCAGC 36082 Query 148063 TGTCGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCACTCCCTCG-ttt 148121 || | | || | || ||||| | ||||| ||||||| ||| | | ||| | ||| Sbjct 36083 TGAAG-TGTACTCCACTATTTCAGTACACAAATTGCTGCACTTAAT-AGTTCCTAGATTT 36140 Query 148122 ttttGATTATTTTTATTGTT-AACGTGATCTTTAAACATCATGTATGGAGCTCCGGTCTC 148180 ||||| ||| |||| ||| ||| | |||||| ||| ||| ||||| | ||| || || Sbjct 36141 TTTTGGTTACTTTTGCGGTTGCACGAG-TCTTTATACAACATATATGGTGTTCCCGTTTC 36199 Query 148181 GACTTGAGTCTCAATAAT--TTTTCTATGAAGATCTAAAGCCGAAATTTGTTTTTTAAAC 148238 ||||| | || ||||| |||| | ||| | ||| || ||| || ||| Sbjct 36200 TACTTGTGCTTCTATAATAGCTTTCCA--CAGAGCCTGAGCTTTAACTTGCTTAACAAAT 36257 Query 148239 TTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTT 148298 ||| || || || | ||| || |||| ||||||| || | ||||| | Sbjct 36258 CGATTTTCTTTTTCATATTTCTTGTATAGTGCCTCAAATTCTTCTCCCCAACAATCTGCT 36317 Query 148299 AAACCGGGACACTCGTCGGGGCACATCAATGACCA--TTTCCCTCCTGTCTTTACCCTCT 148356 || || ||||| || | || ||||| | ||| |||| | | ||| ||| || | Sbjct 36318 AAGCCTGGACAGTCATGAGGACACATAAGACTCCAATTTTCATTAC--TCTCTACTCTTT 36375 Query 148357 TCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATA--TCCTC 148414 ||||||| | ||||||| |||| | ||| ||| || || | ||| || || || || Sbjct 36376 TCATAAATAAATCAGGTATCCATAAAGCATAAAAGAGTTCTCTAGC--TCGTACTTCTTC 36433 Query 148415 GGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGAT 148474 || |||| || ||||| || || |||| ||||| ||||| || || | Sbjct 36434 TTTGCCAGTATTTTTTTTCAGATCTAAGAATTCGAAAATATCTGCATGCCATGGTTCCAA 36493 Query 148475 GTATAC 148480 |||||| Sbjct 36494 GTATAC 36499 >seq62 Length=1252031 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || || ||||| || ||||| | ||||| | || || ||| ||||| ||||| ||| Sbjct 685817 ACTCACGATGACCTGTGGAACTCGGCTCAACTGCAACTGGTCAAGGAGGGCAAAATGCAC 685876 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | ||| |||||||||||| |||||||||||||||||||| | | || || | Sbjct 685877 GGGTTCCTGCGCATGTACTGGTGTAAAAAGATTCTCGAGTGGACGCCCAGCCCGGAAGAC 685936 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 |||||| |||| | || ||||| |||||| ||||| | || || | ||||| | Sbjct 685937 GCGCTCAAGTACGCGATATATCTTAACGATCACTACAGCATTGATGGAAGGGATCCCAGT 685996 Query 71852 GGTTATGTCGGT 71863 || | ||| ||| Sbjct 685997 GGATTTGTGGGT 686008 >seq4 Length=2913607 Score = 102 bits (112), Expect = 8e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 115203 GCACGGATTTCATGTTCACGAATTCGGCGACACGAGCAACGGCTGCACGTCTGCAGGCGA 115262 |||||| || || || || || ||||| |||| | ||||||||||| || || |||| Sbjct 2347857 GCACGGTTTCCACGTGCATGAGTTCGGTGACAACACAAACGGCTGCACATCGGCCGGCGC 2347916 Query 115263 GCATTTTAACCCTACGAACATGGCTCACGGTGCGCCCAACTCTGCCGTTCGTCACGTCGG 115322 ||| |||||||| ||| || ||||||| ||| || | |||| ||||||||||| Sbjct 2347917 GCACTTTAACCCGCTGAAGCAGGAGCACGGTGGCCCCGACGCGTCCGTGCGTCACGTCGG 2347976 Query 115323 TGATCTTGGCAATATTGATGC 115343 |||||| ||||| ||||| || Sbjct 2347977 TGATCTCGGCAACATTGAGGC 2347997 >seq158 Length=707457 Score = 91.5 bits (100), Expect = 1e-13 Identities = 172/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 26763 AACAA-AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||||| |||||| | || || ||||| |||| || || | |||||| | || | || Sbjct 607070 AACAACAATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGA 607129 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | ||||||||||| | || || ||||| || |||||||| || ||||| Sbjct 607130 GGCTTCAGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCC 607189 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || ||||| ||||||| | || |||||| || | ||||||| | | | || Sbjct 607190 GGACCAACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGA 607249 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAAT 27001 || || || || |||||||| ||| | || |||| || || ||||||||||| || Sbjct 607250 TTACAATATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTAGAGGAGGTAA--- 607306 Query 27002 ATGATTAGTTT 27012 |||||| |||| Sbjct 607307 ATGATTGGTTT 607317 >seq36 Length=1647457 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| ||| | || || | ||| | || | Sbjct 456055 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACTATTACTCTTGAAGTTGAGCCTTCT 456114 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || |||||| ||||||||||| || || || || || Sbjct 456115 GACACCATTGAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 456174 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || |||||||| ||||| |||| | | | || |||||| ||| Sbjct 456175 CAGCGATTGATCTTCGCTGGCAAACAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 456234 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || || || || |||||| | || ||||| || | ||| | || ||||| Sbjct 456235 ATCCAGAAGGAGTCTACTCTTCACCTGGTGCTTCGTCTTCGCGGTGGAAA 456284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478537522963120