Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq616 89.7 1e-12 >seq616 Length=113079 Score = 89.7 bits (98), Expect = 1e-12 Identities = 269/411 (65%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808 ||| ||||||||||| || ||||| || || || || || || || |||| || ||||| Sbjct 35597 AGCTCCCATGCCCACAGCATCTACAGCTCAAATTCTTGGCAATAATGAGTCATTTGAACC 35538 Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868 | || |||| | ||| | || ||||| || || ||||||| || |||||| | Sbjct 35537 CATAACCTCCAATATATATCAGAGACGCGTTCTATCAGGTGAATTTCAAGTTGTTAATCA 35478 Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928 | ||| | ||||| | || | |||||| ||| |||||| ||| ||| Sbjct 35477 CCATCTATTACGTGATCTCACAGAAGCTGAATTGTGGGATGAAGACATGAAAAACCTTAT 35418 Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTAT 364988 |||| | ||||| || | || | |||| | | |||| |||| | | | | Sbjct 35417 CATCCACAACAATGGCTCCATACAAAGCATTGAGGTAATTCCTAAAGAAATTAGAGATTT 35358 Query 364989 TTACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 |||||||| || ||||||||||| | || | || ||| | ||||| || || | | Sbjct 35357 GTACAAAACTGTTTGGGAAATTTCTGTTAAGACCACT-ATTCAAATGGCAGCAGACAGGG 35299 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG--CCAACCTCCGC 365105 | || ||||| ||| ||||| || || ||| ||||||| ||| || | | | Sbjct 35298 GAGCATTTATAGATCAAAGCCAATCATTCAAC--ATTCATGTTGCAGAACCTAATTATGG 35241 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||| || || || ||||| || |||||| ||| | || ||||| Sbjct 35240 GAAGCTAACTTCTATTCATTTTTATTCCTGGAAAATGGGTTTGAAAACAGG 35190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303005070621122