Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq44 237 1e-57 seq4 109 5e-19 seq36 96.9 3e-15 >seq44 Length=1464967 Score = 237 bits (262), Expect = 1e-57 Identities = 349/494 (71%), Gaps = 0/494 (0%) Strand=Plus/Plus Query 32171 GTCGCTGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTG 32230 |||| |||||| || |||||||||||||||||| ||| || ||||| |||||||||| Sbjct 1426400 GTCGGTGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGACAAAGTT 1426459 Query 32231 CCGTTGCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGA 32290 || | ||||| || | || | |||||||| || || || ||||||||||| || || Sbjct 1426460 CCCGTTCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGGTGATGGC 1426519 Query 32291 CTAAACGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAA 32350 | ||||| | || || ||| ||||| | || |||||||| || |||| Sbjct 1426520 ATTAACGACAGTTTGAAGGAAATTGAGGGTAGTTTCCAAGCACTGCAACGCTCCTGCAGC 1426579 Query 32351 GGCCGCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAG 32410 || || | |||||| || || |||| ||||| |||||||| || | ||||| || ||| Sbjct 1426580 GGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCAAAAGCCACAG 1426639 Query 32411 AAGGGCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCC 32470 |||||| | || | ||||| || || ||||| ||||| || || ||| ||||| | Sbjct 1426640 AAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACTGATGATGTTG 1426699 Query 32471 AAGTTGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGAT 32530 || ||| || ||| || | || ||| | || || | || || ||||| || | ||| Sbjct 1426700 AAACAGGCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGTTGGACCCTGGCTGAT 1426759 Query 32531 CCCTTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAG 32590 ||||| | || | | ||| | || | || || || | ||| ||||| || Sbjct 1426760 CCCTTCTTCTTCTTCGATGACAAAGTTAAGAGAGACCGCTTCGTTGGTTCAGTCAAGGAC 1426819 Query 32591 TTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGC 32650 ||||||||| ||||||||||| || || || || ||||||||||||||||| || || Sbjct 1426820 TTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGGAGTTCCCTGGAGGT 1426879 Query 32651 AAAGGTGCCAACCC 32664 || || || ||||| Sbjct 1426880 AAGGGAGCTAACCC 1426893 >seq4 Length=2913607 Score = 109 bits (120), Expect = 5e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 112403 GTTGCCTAGGTCACCGACGTGTCGCTCGGCGGCGTCGGGTGCGCCATGGTCTTGGTTCGT 112462 |||||| || ||||||||||| ||| ||| |||||||| | || || || || ||| Sbjct 2347989 GTTGCCGAGATCACCGACGTGACGCACGGACGCGTCGGGGCCACCGTGCTCCTGCTTCAG 2347930 Query 112463 GGGGTTAAAATGCTCGCCCGCCGACGTGCACCCGTTGCTAGTGTCGCCAAACTCGTGCAC 112522 |||||||| ||| |||| ||||| ||||| ||||| | |||| || ||||| ||||| Sbjct 2347929 CGGGTTAAAGTGCGCGCCGGCCGATGTGCAGCCGTTTGTGTTGTCACCGAACTCATGCAC 2347870 Query 112523 GTGAAAACCGTGC 112535 ||| ||||||||| Sbjct 2347869 GTGGAAACCGTGC 2347857 >seq36 Length=1647457 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| ||||| || ||||| | || || |||||||| || ||||| ||| | Sbjct 454915 AAGATGCAGATTTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCCG 454974 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 |||||| ||| | || ||| |||||| ||||| ||||| | ||| ||| Sbjct 454975 TCAGACACTATTGAGAACGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGAT 455034 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| |||| || | ||| || || ||||||||||| | | ||| | | |||||| Sbjct 455035 CAGCAGCGACTGATCTTTGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTAT 455094 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || || ||||| ||| | || ||||| Sbjct 455095 AACATCCAGAAGGAGTCAACTCTTCACCTGGTG 455127 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| ||||| || || ||||| || || | ||| ||| ||| | Sbjct 937517 ATGCAAATTTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGA-ACCATC 937459 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | || ||| ||||| ||||| |||||| | || ||||| Sbjct 937458 GGACACAATTGAGAATGTTAAAGCTAAAATCCAGGATAAGGAAGGCATTCCTCCAGATCA 937399 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| ||||||| | ||| || ||||| | || || | | || || | ||||| || Sbjct 937398 GCAGCGACTTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTACAA 937339 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| |||||||| ||| | ||| | || | ||| | || || |||| Sbjct 937338 CATTCAGAAAGAGTCCACTCTGCATTTAGTACTCAGACTCCGCGGTGGAA 937289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425235807240520